dr. A. (Anne) de Jong

Bioinformatician / Lecturer

Faculty of Science and Engineering

Telephone:

+31 50 36 32047

+31 6 4989 3518 (Mobile)

E-mail:

anne.de.jong rug.nl

Homepage Research Portal

Publications

A systematic comparison of natural product potential, with an emphasis on RiPPs, by mining of bacteria of three large ecosystems

Yi, Y., Liang, L., de Jong, A. & Kuipers, O. P., Jul-2024, In: GENOMICS. 116, 4, 14 p., 110880.

Research output: Contribution to journal › Article › Academic › peer-review

Differential Virulence of Aggregatibacter actinomycetemcomitans Serotypes Explained by Exoproteome Heterogeneity

Fu, Y., Maaβ, S., Cavallo, F. M., de Jong, A., Raangs, E., Westra, J., Buist, G., Becher, D. & van Dijl, J. M., Feb-2023, In: Microbiology Spectrum. 11, 1, e0329822.

Research output: Contribution to journal › Article › Academic › peer-review

Food safety and biological control; genomic insights and antimicrobial potential of Bacillus velezensis FB2 against agricultural fungal pathogens

Hammad, M., Ali, H., Hassan, N., Tawab, A., Salman, M., Jawad, I., de Jong, A., Moreno, C. M., Kuipers, O. P., Feroz, Y. & Rashid, M. H., 14-Nov-2023, In: PLoS ONE. 18, 11, 16 p., e0291975.

Research output: Contribution to journal › Article › Academic › peer-review

Connections between Exoproteome Heterogeneity and Virulence in the Oral Pathogen Aggregatibacter actinomycetemcomitans

Fu, Y., Maass, S., du Teil Espina, M., Wolters, A. H. G., Gong, Y., de Jong, A., Raangs, E., Buist, G., Westra, J., Becher, D. & van Dijl, J. M., 13-Jun-2022, In: Msystems. 7, 3, 23 p., e0025422.

Research output: Contribution to journal › Article › Academic › peer-review

Draft Genome Sequences of Bacillus velezensis Strains AF_3B and OS2, Bacillus amyloliquefaciens Strain BS9, Bacillus halotolerans Strain A1, and Bacillus sp. Strain BS3, Producing Biosurfactants with Antimicrobial Potential

Farooq, S. A., de Jong, A., Khaliq, S. & Kuipers, O. P., Nov-2022, In: Microbiology resource announcements. 11, 10, 1 p., e0048222.

Research output: Contribution to journal › Article › Academic › peer-review

FUNAGE-Pro: comprehensive web server for gene set enrichment analysis of prokaryotes

de Jong, A., Kuipers, O. P. & Kok, J., Jul-2022, In: Nucleic Acids Research. 50, W1, p. 330-336 7 p., gkac441.

Research output: Contribution to journal › Article › Academic › peer-review

G-Quadruplex DNA as a Target in Pathogenic Bacteria: Efficacy of an Extended Naphthalene Diimide Ligand and Its Mode of Action

Cebrián, R., Belmonte-Reche, E., Pirota, V., de Jong, A., Morales, J. C., Freccero, M., Doria, F. & Kuipers, O. P., 24-Mar-2022, In: Journal of Medicinal Chemistry. 65, 6, p. 4752-4766 15 p.

Research output: Contribution to journal › Article › Academic › peer-review

Human milk oligosaccharides and non-digestible carbohydrates reduce pathogen adhesion to intestinal epithelial cells by decoy effects or by attenuating bacterial virulence

Kong, C., de Jong, A., de Haan, B. J., Kok, J. & de Vos, P., Jan-2022, In: Food Research International. 151, 110867.

Research output: Contribution to journal › Article › Academic › peer-review

Staphylococcus aureus populations from the gut and the blood are not distinguished by virulence traits: a critical role of host barrier integrity

Raineri, E. J. M., Maaß, S., Wang, M., Brushett, S., Palma Medina, L. M., Sampol Escandell, N., Altulea, D., Raangs, E., de Jong, A., Vera Murguia, E., Feil, E. J., Friedrich, A. W., Buist, G., Becher, D., García-Cobos, S., Couto, N. & van Dijl, J. M., 26-Dec-2022, In: Microbiome. 10, 1, 23 p., 239.

Research output: Contribution to journal › Article › Academic › peer-review