1. Marked Changes in Gut Microbiota in Cardio-Surgical Intensive Care Patients: A Longitudinal Cohort Study

   Aardema, H., Lisotto, P., Kurilshikov, A., Diepeveen, J. R. J., Friedrich, A. W., Sinha, B., de Smet, A. M. G. A. & Harmsen, H. J. M., 15-Jan-2020, In : Frontiers in Cellular and Infection Microbiology. 9, 10 p., 467.

   Research output: Contribution to journal › Article › Academic › peer-review

2. Impact of commonly used drugs on the composition and metabolic function of the gut microbiota

   Vich Vila, A., Collij, V., Sanna, S., Sinha, T., Imhann, F., Bourgonje, A. R., Mujagic, Z., Jonkers, D. M. A. E., Masclee, A. A. M., Fu, J., Kurilshikov, A., Wijmenga, C., Zhernakova, A. & Weersma, R. K., 17-Jan-2020, In : Nature Communications. 11, 1, 11 p., 362.

   Research output: Contribution to journal › Article › Academic › peer-review

3. Studying the gut virome in the metagenomic era: challenges and perspectives

   Garmaeva, S., Sinha, T., Kurilshikov, A., Wijmenga, C., Fu, J. & Zhernakova, S., 28-Oct-2019, In : BMC Biology. 17, 1, 14 p., 84.

   Research output: Contribution to journal › Review article › Academic › peer-review

4. Combining absolute quantification of fecal bacteria with metagenomic sequencing data improves the characterization of the gut microbiome of patients with Crohn’s disease

   Vich Vila, A., Boddeke, A., Kurilshikov, A., Collij, V., Sureda Horrach, P., Martels ,von, J. Z. H., Bourgonje, A. R., Klaassen, M. A. Y., Hu, S., Jansen, D., Faber, K. N., Dijkstra, G., Zhernakova, S., Harmsen, H. J. M. & Weersma, R. K., Oct-2019, In : United European Gastroenterology Journal.

   Research output: Contribution to journal › Meeting Abstract › Academic

5. Global phylogeography and ancient evolution of the widespread human gut virus crAssphage

   Edwards, R. A., Vega, A. A., Norman, H. M., Ohaeri, M., Levi, K., Dinsdale, E. A., Cinek, O., Aziz, R. K., McNair, K., Barr, J. J., Bibby, K., Brouns, S. J. J., Cazares, A., de Jonge, P. A., Desnues, C., Díaz Muñoz, S. L., Fineran, P. C., Kurilshikov, A., Lavigne, R., Mazankova, K., McCarthy, D. T., Nobrega, F. L., Reyes Muñoz, A., Tapia, G., Trefault, N., Tyakht, A. V., Vinuesa, P., Wagemans, J., Zhernakova, A., Aarestrup, F. M., Ahmadov, G., Alassaf, A., Anton, J., Asangba, A., Billings, E. K., Cantu, V. A., Carlton, J. M., Cazares, D., Cho, G-S., Condeff, T., Cortés, P., Cranfield, M., Cuevas, D. A., De la Iglesia, R., Decewicz, P., Doane, M. P., Dominy, N. J., Dziewit, L., Elwasila, B. M., Eren, A. M., Franz, C., Fu, J., Garcia-Aljaro, C., Ghedin, E., Gulino, K. M., Haggerty, J. M., Head, S. R., Hendriksen, R. S., Hill, C., Hyöty, H., Ilina, E. N., Irwin, M. T., Jeffries, T. C., Jofre, J., Junge, R. E., Kelley, S. T., Khan Mirzaei, M., Kowalewski, M., Kumaresan, D., Leigh, S. R., Lipson, D., Lisitsyna, E. S., Llagostera, M., Maritz, J. M., Marr, L. C., McCann, A., Molshanski-Mor, S., Monteiro, S., Moreira-Grez, B., Morris, M., Mugisha, L., Muniesa, M., Neve, H., Nguyen, N-P., Nigro, O. D., Nilsson, A. S., O'Connell, T., Odeh, R., Oliver, A., Piuri, M., Prussin Ii, A. J., Qimron, U., Quan, Z-X., Rainetova, P., Ramírez-Rojas, A., Raya, R., Reasor, K., Rice, G. A. O., Rossi, A., Santos, R., Shimashita, J., Stachler, E. N., Stene, L. C., Strain, R., Stumpf, R., Torres, P. J., Twaddle, A., Ugochi Ibekwe, M., Villagra, N., Wandro, S., White, B., Whiteley, A., Whiteson, K. L., Wijmenga, C., Zambrano, M. M., Zschach, H. & Dutilh, B. E., Oct-2019, In : Nature Microbiology. 4, 10, p. 1727-1736 10 p.

   Research output: Contribution to journal › Article › Academic › peer-review

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