Billerbeck group Publications
Please find an overview of publications below.
2023
Billerbeck,
S., Prins, R. C., & Marquardt, M. (2023).
A Modular Cloning Toolkit Including CRISPRi for the
Engineering of the Human Fungal Pathogen and Biotechnology Host
Candida glabrata. ACS Synthetic
Biology, 12, 1358-1363. Article 00560. https://doi.org/10.1021/acssynbio.2c00560
Aldulijan,
I., Beal, J., Billerbeck, S., Bouffard, J.,
Chambonnier, G., Ntelkis, N., Guerreiro, I., Holub, M., Ross, P.,
Selvarajah, V., Sprent, N., Vidal, G., & Vignoni, A. (2023).
Functional Synthetic Biology. Synthetic
biology (Oxford, England), 8(1), Article
ysad006. https://doi.org/10.1093/synbio/ysad006
Widodo,
W. S., & Billerbeck, S. (2023).
Natural and engineered cyclodipeptides: Biosynthesis,
chemical diversity, and engineering strategies for diversification
and high-yield bioproduction. Engineering
Microbiology, 3(1), Article 100067. https://doi.org/10.1016/j.engmic.2022.100067
2022
Bhatt,
D., Crooijmans, M. E., Coenradij, J.,
Macia Valero, A., Lubbers, M. J., Asin-Garcia, E., Amy
Yewdall, N., D'Adamo, S., Claassens, N. J., & Billerbeck,
S. (2022). A SynBio community comes of age: Political,
academical, industrial, and societal developments in the
Netherlands. Biotechnology notes,
3, 62-69. Advance online publication. https://doi.org/10.1016/j.biotno.2022.07.004
Billerbeck,
S., Oliveira, A. G., & Gonçalves, A. P. (2022).
Editorial: Fungi as cell factories: Genetic engineering and
applications. Frontiers in Bioengineering and
Biotechnology, 10, Article 1109992. https://doi.org/10.3389/fbioe.2022.1109992
Beal,
J., Telmer, C. A., Vignoni, A., Boada, Y., Baldwin, G. S., Hallett,
L., Lee, T., Selvarajah, V., Billerbeck, S., Brown,
B., Cai, G. N., Cai, L., Eisenstein, E., Kiga, D., Ross, D.,
Alperovich, N., Sprent, N., Thompson, J., Young, E. M., ...
Haddock-Angelli, T. (2022). Multicolor plate reader
fluorescence calibration. Synthetic
Biology, 7(1), 1-9. https://doi.org/10.1093/synbio/ysac010
Billerbeck,
S. (2022). Self-growing environmentally responsive
houses made from agricultural waste and fungal mycelia.
Synthetic biology (Oxford, England),
7(1), Article ysac003. https://doi.org/10.1093/synbio/ysac003
2021
Kuiper,
B. P., Prins, R. C., & Billerbeck,
S. (2022). Oligo pools as an affordable source of
synthetic DNA for cost-effective library construction in protein-
and metabolic pathway engineering.
ChemBioChem, 23(7), Article
202100507. Advance online publication. https://doi.org/10.1002/cbic.202100507
Billerbeck,
S., & Cornish, V. W. (2022). Peptide-Dependent
Growth in Yeast via Fine-Tuned Peptide/GPCR-Activated Essential
Gene Expression. Biochemistry,
61(3), 150-159. Article 00661. Advance online publication.
https://doi.org/10.1021/acs.biochem.1c00661
Prins,
R. C., & Billerbeck, S. (2021). A
buffered media system for yeast batch culture growth.
BMC Microbiology, 21(1), Article
127. https://doi.org/10.1186/s12866-021-02191-5
Billerbeck,
S. (2021). A computational walk to the hidden peaks of
protein performance. Synthetic biology (Oxford,
England), 6(1), Article ysab011. https://doi.org/10.1093/synbio/ysab011
Billerbeck,
S. (2021). Moving towards chemical-free agriculture,
37 kb at a time. Synthetic biology (Oxford,
England), 6(1), Article ysab009. https://doi.org/10.1093/synbio/ysab009
Billerbeck,
S. (2021). Synthetic biological toggle circuits that
respond within seconds and teach us new biology.
Synthetic biology (Oxford, England),
6(1). Advance online publication. https://doi.org/10.1093/synbio/ysab027
2020
Billerbeck,
S. (2020). Directed evolution of synthetic
coexistence: A new path towards ecosystem design?
Synthetic biology (Oxford, England),
5(1), Article ysaa025. https://doi.org/10.1093/synbio/ysaa025
2019
Billerbeck,
S., Brisbois, J., Agmon, N., Jimenez, M., Temple, J., Shen,
M., Boeke, J. D., & Cornish, V. W. (2019). Author
correction: A scalable peptide-GPCR language for engineering
multicellular communication (vol 9, 5057, 2018).
Nature Communications, 10, Article
554. https://doi.org/10.1038/s41467-019-08545-y
2018
Billerbeck,
S., Brisbois, J., Agmon, N., Jimenez, M., Temple, J., Shen,
M., Boeke, J. D., & Cornish, V. W. (2018). A scalable
peptide-GPCR language for engineering multicellular
communication. Nature Communications,
9, Article 5057. https://doi.org/10.1038/s41467-018-07610-2
Billerbeck,
S. (2018). Small Functional Peptides and Their
Application in Superfunctionalizing Proteins. In C. Smolke,
S. Y. Lee, J. Nielsen, & G. Stephanopoulos (Eds.),
Synthetic Biology: Parts, Devices and Applications (Vol.
8, pp. 217-235). Wiley Online Library. https://doi.org/10.1002/9783527688104.ch11
2017
Ostrov,
N., Jimenez, M., Billerbeck, S., Brisbois, J.,
Matragrano, J., Ager, A., & Cornish, V. W. (2017). A
modular yeast biosensor for low-cost point-of-care pathogen
detection. Science Advances,
3(6), Article e1603221. https://doi.org/10.1126/sciadv.1603221
Oesterle,
S., Roberts, T. M., Widmer, L. A., Mustafa, H., Panke, S.,
& Billerbeck, S. (2017). Sequence-based prediction
of permissive stretches for internal protein tagging and
knockdown. BMC Biology, 15,
Article 100. https://doi.org/10.1186/s12915-017-0440-0
2016
Hold,
C., Billerbeck, S., & Panke, S. (2016).
Forward design of a complex enzyme cascade reaction.
Nature Communications, 7, Article
12971. https://doi.org/10.1038/ncomms12971
2013
Billerbeck,
S., Haerle, J., & Panke, S. (2013). The good of
two worlds: increasing complexity in cell-free systems.
Current Opinion in Biotechnology,
24(6), 1037-1043. https://doi.org/10.1016/j.copbio.2013.03.007
Billerbeck,
S., Calles, B., Mueller, C. L., de Lorenzo, V., & Panke,
S. (2013). Towards functional orthogonalisation of protein
complexes: individualisation of GroEL monomers leads to distinct
quasihomogeneous single rings.
ChemBioChem, 25(14), 2310-2312. https://doi.org/10.1002/cbic.201300332
2012
Billerbeck,
S., & Panke, S. (2012). A genetic replacement
system for selection-based engineering of essential
proteins. Microbial Cell Factories,
11, Article 110. https://doi.org/10.1186/1475-2859-11-110
Billerbeck,
S., & Panke, S. (2012). Synthetische Biologie
– Biotechnologie als eine Ingenieurwissenschaft. In J.
Boldt, O. Mueller, & G. Maio (Eds.), Leben schaffen?:
Philosophische und ethische Reflexionen zur Synthetischen
Biologie (Vol. 1, pp. 19-41). Mentis Verlag GmbH.
Billerbeck,
S., Dietz, S., Morgado, G., & Panke, S. (2012).
Technologies for Biosystems Engineering. In C.
Wittmann, & S. Y. Lee (Eds.), Systems Metabolic
Engineering (Vol. 1, pp. 83-108). Springer.
2011
Bujara,
M., Billerbeck, S., & Panke, S. (2011).
Multienzymnetzwerke für die Feinchemie.
BIOspektrum, 17(4), 399-401. https://doi.org/10.1007/s12268-011-0061-z
2010
Bujara,
M., Schümperli, M., Billerbeck, S.,
Heinemann, M., & Panke, S. (2010). Exploiting
Cell-Free Systems: Implementation and Debugging of a System of
Biotransformations. Biotechnology and
Bioengineering, 106(3), 376-389. https://doi.org/10.1002/bit.22666
Bujara,
M., Billerbeck, S., Greve, F., & Panke, S. (2010).
Synthetic biology for biocatalysis. In K. N. Timmis,
T. J. McGenity, J. R. van der Meer, & V. de Lorenzo (Eds.),
Handbook of Hydrocarbon and Lipid Microbiology (1 ed., pp.
2939-2950). Springer.
| Last modified: | 09 June 2023 8.36 p.m. |