Billerbeck group Publications
Please find an overview of publications below.
2023
Billerbeck,
S., Prins, R. C., & Marquardt, M. (2023).
A Modular Cloning Toolkit Including CRISPRi for the
Engineering of the Human Fungal Pathogen and Biotechnology Host
Candida glabrata. ACS Synthetic
Biology, 12, 1358-1363. [00560]. https://doi.org/10.1021/acssynbio.2c00560
Aldulijan,
I., Beal, J., Billerbeck, S., Bouffard, J.,
Chambonnier, G., Ntelkis, N., Guerreiro, I., Holub, M., Ross, P.,
Selvarajah, V., Sprent, N., Vidal, G., & Vignoni, A. (2023).
Functional Synthetic Biology. Synthetic
biology (Oxford, England), 8(1), [ysad006]. https://doi.org/10.1093/synbio/ysad006
Widodo,
W. S., & Billerbeck, S. (2023).
Natural and engineered cyclodipeptides: Biosynthesis,
chemical diversity, and engineering strategies for diversification
and high-yield bioproduction. Engineering
Microbiology, 3(1), [100067]. https://doi.org/10.1016/j.engmic.2022.100067
2022
Bhatt,
D., Coenradij, J., Macia Valero,
A., & Billerbeck, S. (2022). A SynBio
community comes of age: Political, academical, industrial, and
societal developments in the Netherlands.
Biotechnology notes, 3, 62-69. https://doi.org/10.1016/j.biotno.2022.07.004
Billerbeck,
S., Oliveira, A. G., & Gonçalves, A. P. (2022).
Editorial: Fungi as cell factories: Genetic engineering and
applications. Frontiers in Bioengineering and
Biotechnology, 10, [1109992]. https://doi.org/10.3389/fbioe.2022.1109992
Beal,
J., Telmer, C. A., Vignoni, A., Boada, Y., Baldwin, G. S., Hallett,
L., Lee, T., Selvarajah, V., Billerbeck, S., Brown,
B., Cai, G. N., Cai, L., Eisenstein, E., Kiga, D., Ross, D.,
Alperovich, N., Sprent, N., Thompson, J., Young, E. M., ...
Haddock-Angelli, T. (2022). Multicolor plate reader
fluorescence calibration. Synthetic
Biology, 7(1), 1-9. https://doi.org/10.1093/synbio/ysac010
Billerbeck,
S. (2022). Self-growing environmentally responsive
houses made from agricultural waste and fungal mycelia.
Synthetic biology (Oxford, England),
7(1), [ysac003]. https://doi.org/10.1093/synbio/ysac003
2021
Kuiper,
B. P., Prins, R. C., & Billerbeck,
S. (2022). Oligo pools as an affordable source of
synthetic DNA for cost-effective library construction in protein-
and metabolic pathway engineering.
ChemBioChem, 23(7), [202100507]. https://doi.org/10.1002/cbic.202100507
Billerbeck,
S., & Cornish, V. W. (2022). Peptide-Dependent
Growth in Yeast via Fine-Tuned Peptide/GPCR-Activated Essential
Gene Expression. Biochemistry,
61(3), 150-159. [00661]. https://doi.org/10.1021/acs.biochem.1c00661
Prins,
R. C., & Billerbeck, S. (2021). A
buffered media system for yeast batch culture growth.
BMC Microbiology, 21(1), [127]. https://doi.org/10.1186/s12866-021-02191-5
Billerbeck,
S. (2021). A computational walk to the hidden peaks of
protein performance. Synthetic biology (Oxford,
England), 6(1), [ysab011]. https://doi.org/10.1093/synbio/ysab011
Billerbeck,
S. (2021). Moving towards chemical-free agriculture,
37 kb at a time. Synthetic biology (Oxford,
England), 6(1), [ysab009]. https://doi.org/10.1093/synbio/ysab009
Billerbeck,
S. (2021). Synthetic biological toggle circuits that
respond within seconds and teach us new biology.
Synthetic biology (Oxford, England),
6(1). https://doi.org/10.1093/synbio/ysab027
2020
Billerbeck,
S. (2020). Directed evolution of synthetic
coexistence: A new path towards ecosystem design?
Synthetic biology (Oxford, England),
5(1), [ysaa025]. https://doi.org/10.1093/synbio/ysaa025
2019
Billerbeck,
S., Brisbois, J., Agmon, N., Jimenez, M., Temple, J., Shen,
M., Boeke, J. D., & Cornish, V. W. (2019). Author
correction: A scalable peptide-GPCR language for engineering
multicellular communication (vol 9, 5057, 2018).
Nature Communications, 10, [554]. https://doi.org/10.1038/s41467-019-08545-y
2018
Billerbeck,
S., Brisbois, J., Agmon, N., Jimenez, M., Temple, J., Shen,
M., Boeke, J. D., & Cornish, V. W. (2018). A scalable
peptide-GPCR language for engineering multicellular
communication. Nature Communications,
9, [5057]. https://doi.org/10.1038/s41467-018-07610-2
Billerbeck,
S. (2018). Small Functional Peptides and Their
Application in Superfunctionalizing Proteins. In C. Smolke,
S. Y. Lee, J. Nielsen, & G. Stephanopoulos (Eds.),
Synthetic Biology: Parts, Devices and Applications (Vol.
8, pp. 217-235). Wiley Online Library. https://doi.org/10.1002/9783527688104.ch11
2017
Ostrov,
N., Jimenez, M., Billerbeck, S., Brisbois, J.,
Matragrano, J., Ager, A., & Cornish, V. W. (2017). A
modular yeast biosensor for low-cost point-of-care pathogen
detection. Science Advances,
3(6), [e1603221]. https://doi.org/10.1126/sciadv.1603221
Oesterle,
S., Roberts, T. M., Widmer, L. A., Mustafa, H., Panke, S.,
& Billerbeck, S. (2017). Sequence-based prediction
of permissive stretches for internal protein tagging and
knockdown. BMC Biology, 15,
[100]. https://doi.org/10.1186/s12915-017-0440-0
2016
Hold,
C., Billerbeck, S., & Panke, S. (2016).
Forward design of a complex enzyme cascade reaction.
Nature Communications, 7, [12971].
https://doi.org/10.1038/ncomms12971
2013
Billerbeck,
S., Haerle, J., & Panke, S. (2013). The good of
two worlds: increasing complexity in cell-free systems.
Current Opinion in Biotechnology,
24(6), 1037-1043. https://doi.org/10.1016/j.copbio.2013.03.007
Billerbeck,
S., Calles, B., Mueller, C. L., de Lorenzo, V., & Panke,
S. (2013). Towards functional orthogonalisation of protein
complexes: individualisation of GroEL monomers leads to distinct
quasihomogeneous single rings.
ChemBioChem, 25(14), 2310-2312. https://doi.org/10.1002/cbic.201300332
2012
Billerbeck,
S., & Panke, S. (2012). A genetic replacement
system for selection-based engineering of essential
proteins. Microbial Cell Factories,
11, [110]. https://doi.org/10.1186/1475-2859-11-110
Billerbeck,
S., & Panke, S. (2012). Synthetische Biologie
– Biotechnologie als eine Ingenieurwissenschaft. In J.
Boldt, O. Mueller, & G. Maio (Eds.), Leben schaffen?:
Philosophische und ethische Reflexionen zur Synthetischen
Biologie (Vol. 1, pp. 19-41). Mentis Verlag GmbH.
Billerbeck,
S., Dietz, S., Morgado, G., & Panke, S. (2012).
Technologies for Biosystems Engineering. In C.
Wittmann, & S. Y. Lee (Eds.), Systems Metabolic
Engineering (Vol. 1, pp. 83-108). Springer.
2011
Bujara,
M., Billerbeck, S., & Panke, S. (2011).
Multienzymnetzwerke für die Feinchemie.
BIOspektrum, 17(4), 399-401. https://doi.org/10.1007/s12268-011-0061-z
2010
Bujara,
M., Schümperli, M., Billerbeck, S.,
Heinemann, M., & Panke, S. (2010). Exploiting
Cell-Free Systems: Implementation and Debugging of a System of
Biotransformations. Biotechnology and
Bioengineering, 106(3), 376-389. https://doi.org/10.1002/bit.22666
Bujara,
M., Billerbeck, S., Greve, F., & Panke, S. (2010).
Synthetic biology for biocatalysis. In K. N. Timmis,
T. J. McGenity, J. R. van der Meer, & V. de Lorenzo (Eds.),
Handbook of Hydrocarbon and Lipid Microbiology (1 ed., pp.
2939-2950). SPRINGER.
Last modified: | 06 December 2021 3.56 p.m. |