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Research GBB Molecular Microbiology

Billerbeck group Publications

Please find an overview of publications below.

2023

Billerbeck, S., Prins, R. C., & Marquardt, M. (2023). A Modular Cloning Toolkit Including CRISPRi for the Engineering of the Human Fungal Pathogen and Biotechnology Host Candida glabrata. ACS Synthetic Biology, 12, 1358-1363. [00560]. https://doi.org/10.1021/acssynbio.2c00560
Aldulijan, I., Beal, J., Billerbeck, S., Bouffard, J., Chambonnier, G., Ntelkis, N., Guerreiro, I., Holub, M., Ross, P., Selvarajah, V., Sprent, N., Vidal, G., & Vignoni, A. (2023). Functional Synthetic Biology. Synthetic biology (Oxford, England), 8(1), [ysad006]. https://doi.org/10.1093/synbio/ysad006
Widodo, W. S., & Billerbeck, S. (2023). Natural and engineered cyclodipeptides: Biosynthesis, chemical diversity, and engineering strategies for diversification and high-yield bioproduction. Engineering Microbiology, 3(1), [100067]. https://doi.org/10.1016/j.engmic.2022.100067

2022

Bhatt, D., Coenradij, J., Macia Valero, A., & Billerbeck, S. (2022). A SynBio community comes of age: Political, academical, industrial, and societal developments in the Netherlands. Biotechnology notes, 3, 62-69. https://doi.org/10.1016/j.biotno.2022.07.004
Billerbeck, S., Oliveira, A. G., & Gonçalves, A. P. (2022). Editorial: Fungi as cell factories: Genetic engineering and applications. Frontiers in Bioengineering and Biotechnology, 10, [1109992]. https://doi.org/10.3389/fbioe.2022.1109992
Beal, J., Telmer, C. A., Vignoni, A., Boada, Y., Baldwin, G. S., Hallett, L., Lee, T., Selvarajah, V., Billerbeck, S., Brown, B., Cai, G. N., Cai, L., Eisenstein, E., Kiga, D., Ross, D., Alperovich, N., Sprent, N., Thompson, J., Young, E. M., ... Haddock-Angelli, T. (2022). Multicolor plate reader fluorescence calibration. Synthetic Biology, 7(1), 1-9. https://doi.org/10.1093/synbio/ysac010
Billerbeck, S. (2022). Self-growing environmentally responsive houses made from agricultural waste and fungal mycelia. Synthetic biology (Oxford, England), 7(1), [ysac003]. https://doi.org/10.1093/synbio/ysac003

2021

Kuiper, B. P., Prins, R. C., & Billerbeck, S. (2022). Oligo pools as an affordable source of synthetic DNA for cost-effective library construction in protein- and metabolic pathway engineering. ChemBioChem, 23(7), [202100507]. https://doi.org/10.1002/cbic.202100507
Billerbeck, S., & Cornish, V. W. (2022). Peptide-Dependent Growth in Yeast via Fine-Tuned Peptide/GPCR-Activated Essential Gene Expression. Biochemistry, 61(3), 150-159. [00661]. https://doi.org/10.1021/acs.biochem.1c00661
Prins, R. C., & Billerbeck, S. (2021). A buffered media system for yeast batch culture growth. BMC Microbiology, 21(1), [127]. https://doi.org/10.1186/s12866-021-02191-5
Billerbeck, S. (2021). A computational walk to the hidden peaks of protein performance. Synthetic biology (Oxford, England), 6(1), [ysab011]. https://doi.org/10.1093/synbio/ysab011
Billerbeck, S. (2021). Moving towards chemical-free agriculture, 37 kb at a time. Synthetic biology (Oxford, England), 6(1), [ysab009]. https://doi.org/10.1093/synbio/ysab009
Billerbeck, S. (2021). Synthetic biological toggle circuits that respond within seconds and teach us new biology. Synthetic biology (Oxford, England), 6(1). https://doi.org/10.1093/synbio/ysab027

2020

Billerbeck, S. (2020). Directed evolution of synthetic coexistence: A new path towards ecosystem design? Synthetic biology (Oxford, England), 5(1), [ysaa025]. https://doi.org/10.1093/synbio/ysaa025

2019

Billerbeck, S., Brisbois, J., Agmon, N., Jimenez, M., Temple, J., Shen, M., Boeke, J. D., & Cornish, V. W. (2019). Author correction: A scalable peptide-GPCR language for engineering multicellular communication (vol 9, 5057, 2018). Nature Communications, 10, [554]. https://doi.org/10.1038/s41467-019-08545-y

2018

Billerbeck, S., Brisbois, J., Agmon, N., Jimenez, M., Temple, J., Shen, M., Boeke, J. D., & Cornish, V. W. (2018). A scalable peptide-GPCR language for engineering multicellular communication. Nature Communications, 9, [5057]. https://doi.org/10.1038/s41467-018-07610-2
Billerbeck, S. (2018). Small Functional Peptides and Their Application in Superfunctionalizing Proteins. In C. Smolke, S. Y. Lee, J. Nielsen, & G. Stephanopoulos (Eds.), Synthetic Biology: Parts, Devices and Applications (Vol. 8, pp. 217-235). Wiley Online Library. https://doi.org/10.1002/9783527688104.ch11

2017

Ostrov, N., Jimenez, M., Billerbeck, S., Brisbois, J., Matragrano, J., Ager, A., & Cornish, V. W. (2017). A modular yeast biosensor for low-cost point-of-care pathogen detection. Science Advances, 3(6), [e1603221]. https://doi.org/10.1126/sciadv.1603221
Oesterle, S., Roberts, T. M., Widmer, L. A., Mustafa, H., Panke, S., & Billerbeck, S. (2017). Sequence-based prediction of permissive stretches for internal protein tagging and knockdown. BMC Biology, 15, [100]. https://doi.org/10.1186/s12915-017-0440-0

2016

Hold, C., Billerbeck, S., & Panke, S. (2016). Forward design of a complex enzyme cascade reaction. Nature Communications, 7, [12971]. https://doi.org/10.1038/ncomms12971

2013

Billerbeck, S., Haerle, J., & Panke, S. (2013). The good of two worlds: increasing complexity in cell-free systems. Current Opinion in Biotechnology, 24(6), 1037-1043. https://doi.org/10.1016/j.copbio.2013.03.007
Billerbeck, S., Calles, B., Mueller, C. L., de Lorenzo, V., & Panke, S. (2013). Towards functional orthogonalisation of protein complexes: individualisation of GroEL monomers leads to distinct quasihomogeneous single rings. ChemBioChem, 25(14), 2310-2312. https://doi.org/10.1002/cbic.201300332

2012

Billerbeck, S., & Panke, S. (2012). A genetic replacement system for selection-based engineering of essential proteins. Microbial Cell Factories, 11, [110]. https://doi.org/10.1186/1475-2859-11-110
Billerbeck, S., & Panke, S. (2012). Synthetische Biologie – Biotechnologie als eine Ingenieurwissenschaft. In J. Boldt, O. Mueller, & G. Maio (Eds.), Leben schaffen?: Philosophische und ethische Reflexionen zur Synthetischen Biologie (Vol. 1, pp. 19-41). Mentis Verlag GmbH.
Billerbeck, S., Dietz, S., Morgado, G., & Panke, S. (2012). Technologies for Biosystems Engineering. In C. Wittmann, & S. Y. Lee (Eds.), Systems Metabolic Engineering (Vol. 1, pp. 83-108). Springer.

2011

Bujara, M., Billerbeck, S., & Panke, S. (2011). Multienzymnetzwerke für die Feinchemie. BIOspektrum, 17(4), 399-401. https://doi.org/10.1007/s12268-011-0061-z

2010

Bujara, M., Schümperli, M., Billerbeck, S., Heinemann, M., & Panke, S. (2010). Exploiting Cell-Free Systems: Implementation and Debugging of a System of Biotransformations. Biotechnology and Bioengineering, 106(3), 376-389. https://doi.org/10.1002/bit.22666
Bujara, M., Billerbeck, S., Greve, F., & Panke, S. (2010). Synthetic biology for biocatalysis. In K. N. Timmis, T. J. McGenity, J. R. van der Meer, & V. de Lorenzo (Eds.), Handbook of Hydrocarbon and Lipid Microbiology (1 ed., pp. 2939-2950). SPRINGER.
Last modified:06 December 2021 3.56 p.m.