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OnderzoekZernike (ZIAM)THCONKnoester Group

Publications

2018

Guenther, L. M., Loehner, A., Reiher, C., Kunsel, T., Jansen, T. L. C., Tank, M., ... Koehler, J. (2018). Structural Variations in Chlorosomes from Wild-Type and a bchQR Mutant of Chlorobaculum tepidum Revealed by Single-Molecule Spectroscopy. Journal of Physical Chemistry B, 122(26), 6712-6723. DOI: 10.1021/acs.jpcb.8b02875
Thyrhaug, E., Tempelaar, R., Alcocer, M. J. P., Zidek, K., Bina, D., Knoester, J., ... Zigmantas, D. (2018). Identification and characterization of diverse coherences in the Fenna-Matthews-Olson complex. Nature Chemistry, 10(7), 780-786. DOI: 10.1038/s41557-018-0060-5
Farag, M. H., Jansen, T. L. C., & Knoester, J. (2018). The origin of absorptive features in the two-dimensional electronic spectra of rhodopsin. PPCP : Physical Chemistry Chemical Physics, 20(18), 12746-12754. DOI: 10.1039/c8cp00638e
Compaijen, P. J., Malyshev, V. A., & Knoester, J. (2018). Time-dependent transport of a localized surface plasmon through a linear array of metal nanoparticles: Precursor and normal mode contributions. Physical Review. B: Condensed Matter and Materials Physics, 97(8), [085428]. DOI: 10.1103/PhysRevB.97.085428

2017

Tempelaar, R., Jansen, T. L. C., & Knoester, J. (2017). Exciton-Exciton Annihilation Is Coherently Suppressed in H-Aggregates, but Not in J-Aggregates. The Journal of Physical Chemistry Letters, 8(24), 6113-6117. DOI: 10.1021/acs.jpclett.7b02745
Kriete, B., Bondarenko, A. S., Jumde, V. R., Franken, L. E., Minnaard, A. J., Jansen, T. L. C., ... Pshenichnikov, M. S. (2017). Steering Self-Assembly of Amphiphilic Molecular Nanostructures via Halogen Exchange. The Journal of Physical Chemistry Letters, 8(13), 2895-2901. DOI: 10.1021/acs.jpclett.7b00967
Farag, M. H., Hoenders, B. J., Knoester, J., & Jansen, T. L. C. (2017). Spectral line shapes in linear absorption and two-dimensional spectroscopy with skewed frequency distributions. Journal of Chemical Physics, 146(23), [234201]. DOI: 10.1063/1.4985665
Johnson, P. J. M., Farag, M. H., Halpin, A., Morizumi, T., Prokhorenko, V. I., Knoester, J., ... Miller, R. J. D. (2017). The Primary Photochemistry of Vision Occurs at the Molecular Speed Limit. The Journal of Physical Chemistry. B: Materials, Surfaces, Interfaces, & Biophysical, 121(16), 4040-4047. DOI: 10.1021/acs.jpcb.7b02329
Nugroho, B. S., Iskandar, A. A., Malyshev, V. A., & Knoester, J. (2017). Instabilities in the optical response of a semiconductor quantum dot-metal nanoparticle heterodimer: self-oscillations and chaos. Journal of Optics, 19(1), [015004]. DOI: 10.1088/2040-8986/19/1/015004

2016

Bloemsma, E. A., Silvis, M. H., Stradomska, A., & Knoester, J. (2016). Vibronic effects and destruction of exciton coherence in optical spectra of J-aggregates: A variational polaron transformation approach. Chemical Physics, 481, 250-261. DOI: 10.1016/j.chemphys.2016.06.018
Tempelaar, R., Koster, L. J. A., Havenith, R. W. A., Knoester, J., & Jansen, T. L. C. (2016). Charge Recombination Suppressed by Destructive Quantum Interference in Heterojunction Materials (vol 7, pg 198, 2016). The Journal of Physical Chemistry Letters, 7(18), 3659-3659. DOI: 10.1021/acs.jpclett.6b01956
Farag, M. H., Jansen, T. L. C., & Knoester, J. (2016). Probing the Interstate Coupling near a Conical Intersection by Optical Spectroscopy. The Journal of Physical Chemistry Letters, 7(17), 3328-3334. DOI: 10.1021/acs.jpclett.6b01463
Guenther, L. M., Jendrny, M., Bloemsma, E. A., Tank, M., Oostergetel, G. T., Bryant, D. A., ... Koehler, J. (2016). Structure of Light-Harvesting Aggregates in Individual Chlorosomes. The Journal of Physical Chemistry. B: Materials, Surfaces, Interfaces, & Biophysical, 120(24), 5367-5376. DOI: 10.1021/acs.jpcb.6b03718
Tempelaar, R., Halpin, A., Johnson, P. J. M., Cai, J., Murphy, R. S., Knoester, J., ... Jansen, T. L. C. (2016). Laser-Limited Signatures of Quantum Coherence. The Journal of Physical Chemistry. A: Molecules, Spectroscopy, Kinetics, Environment, & General Theory, 120(19), 3042-3048. DOI: 10.1021/acs.jpca.5b10312
Chuang, C., Lee, C. K., Moix, J. M., Knoester, J., & Cao, J. (2016). Quantum Diffusion on Molecular Tubes: Universal Scaling of the 1D to 2D Transition. Physical Review Letters, 116(19), [196803]. DOI: 10.1103/PhysRevLett.116.196803
Dijkstra, A. G., Duan, H-G., Knoester, J., Nelson, K. A., & Cao, J. (2016). How two-dimensional brick layer J-aggregates differ from linear ones: Excitonic properties and line broadening mechanisms. Journal of Chemical Physics, 144(13), [134310]. DOI: 10.1063/1.4944980
Compaijen, P. J., Malyshev, V. A., & Knoester, J. (2016). Elliptically polarized modes for the unidirectional excitation of surface plasmon polaritons. Optics Express, 24(4), 3858-3872. DOI: 10.1364/OE.24.003858
Tempelaar, R., Koster, L. J. A., Havenith, R. W. A., Knoester, J., & Jansen, T. L. C. (2016). Charge Recombination Suppressed by Destructive Quantum Interference in Heterojunction Materials. The Journal of Physical Chemistry Letters, 7(1), 198-203. DOI: 10.1021/acs.jpclett.5b02580

2015

Broer, W., Waalkens, H., Svetovoy, V., Knoester, J., & Palasantzas, G. (2015). Nonlinear Actuation Dynamics of Driven Casimir Oscillators with Rough Surfaces. Physical Review Applied, 4(5), [054016]. DOI: 10.1103/PhysRevApplied.4.054016
Nugroho, B. S., Malyshev, V. A., & Knoester, J. (2015). Tailoring optical response of a hybrid comprising a quantum dimer emitter strongly coupled to a metallic nanoparticle. Physical Review B, 92(16), [165432]. DOI: 10.1103/PhysRevB.92.165432
Hestand, N. J., Tempelaar, R., Knoester, J., Jansen, T. L. C., & Spano, F. C. (2015). Exciton mobility control through sub-angstrom packing modifications in molecular crystals. Physical Review. B: Condensed Matter and Materials Physics, 91(19), [195315]. DOI: 10.1103/PhysRevB.91.195315
Bloemsma, E. A., Vlaming, S. M., Malyshev, V. A., & Knoester, J. (2015). Signature of Anomalous Exciton Localization in the Optical Response of Self-Assembled Organic Nanotubes. Physical Review Letters, 114(15), [156804]. DOI: 10.1103/PhysRevLett.114.156804
Compaijen, P. J., Malyshev, V. A., & Knoester, J. (2015). Engineering plasmon dispersion relations: hybrid nanoparticle chain - substrate plasmon polaritons. Optics Express, 23(3), 2280-2292. DOI: 10.1364/OE.23.002280
van der Vegte, N., Prajapati, J., Kleinekathoefer, U., Knoester, J., & Jansen, T. (2015). Atomistic Modeling of Two-Dimensional Electronic Spectra and Excited State Dynamics for a Light Harvesting 2 Complex. The Journal of Physical Chemistry B, 119(4), 1302–1313. DOI: 10.1021/jp509247p

2014

Tempelaar, R., Jansen, T. L. C., & Knoester, J. (2014). Vibrational Beatings Conceal Evidence of Electronic Coherence in the FMO Light-Harvesting Complex. The Journal of Physical Chemistry B, 118(45), 12865-12872. DOI: 10.1021/jp510074q
Wan, Y., Stradomska, A., Fong, S., Guo, Z., Schaller, R. D., Wiederrecht, G. P., ... Huang, L. (2014). Exciton Level Structure and Dynamics in Tubular Porphyrin Aggregates. The Journal of Physical Chemistry. C: Nanomaterials and Interfaces, 118(43), 24854-24865. DOI: 10.1021/jp507435a
Eisele, D. M., Arias, D. H., Fu, X., Bloemsma, E. A., Steiner, C. P., Jensen, R. A., ... Bawendi, M. G. (2014). Robust excitons inhabit soft supramolecular nanotubes. Proceedings of the National Academy of Science of the United States of America, 111(33), E3367-E3375. DOI: 10.1073/pnas.1408342111
Haverkort, F., Stradomska, A., & Knoester, J. (2014). First-Principles Simulations of the Initial Phase of Self-Aggregation of a Cyanine Dye: Structure and Optical Spectra. The Journal of Physical Chemistry. B: Materials, Surfaces, Interfaces, & Biophysical, 118(29), 8877-8890. DOI: 10.1021/jp5049277
Chuang, C., Knoester, J., & Cao, J. (2014). Scaling Relations and Optimization of Excitonic Energy Transfer Rates between One-Dimensional Molecular Aggregates. The Journal of Physical Chemistry. B: Materials, Surfaces, Interfaces, & Biophysical, 118(28), 7827-7834. DOI: 10.1021/jp4124502
van der Vegte, C. P., Knop, S., Voehringer, P., Knoester, J., & Jansen, T. L. C. (2014). OH-Stretching in Synthetic Hydrogen-Bonded Chains. The Journal of Physical Chemistry B, 118(23), 6256-6264. DOI: 10.1021/jp504267h
Tempelaar, R., Spano, F. C., Knoester, J., & Jansen, T. L. C. (2014). Mapping the Evolution of Spatial Exciton Coherence through Time-Resolved Fluorescence. The Journal of Physical Chemistry Letters, 5(9), 1505-1510. DOI: 10.1021/jz500488u
Jumper, C. C., Anna, J. M., Stradomska, A., Schins, J., Myahkostupov, M., Prusakova, V., ... Scholes, G. D. (2014). Intramolecular radiationless transitions dominate exciton relaxation dynamics. Chemical Physics Letters, 599, 23-33. DOI: 10.1016/j.cplett.2014.03.007
Halpin, A., Johnson, P. J. M., Tempelaar, R., Murphy, R. S., Knoester, J., Jansen, T. L. C., & Miller, R. J. D. (2014). Two-dimensional spectroscopy of a molecular dimer unveils the effects of vibronic coupling on exciton coherences. Nature Chemistry, 6(3), 196-201. DOI: 10.1038/NCHEM.1834
Haverkort, F., Stradomska, A., Vries, A. H. D., & Knoester, J. (2014). First-Principles Calculation of the Optical Properties of an Amphiphilic Cyanine Dye Aggregate. The Journal of Physical Chemistry. A: Molecules, Spectroscopy, Kinetics, Environment, & General Theory, 118(6), 1012-1023. DOI: 10.1021/jp4112487

2013

Compaijen, P. J., Malyshev, V. A., & Knoester, J. (2013). Substrate-mediated sub-diffraction guiding of optical signals through a linear chain of metal nanoparticles: Polarization dependence and the role of the dispersion relation. In Advanced Electromagnetic Materials in Microwaves and Optics (METAMATERIALS), 2013 7th International Congress on (pp. 247-249). IEEE (The Institute of Electrical and Electronics Engineers). DOI: 10.1109/MetaMaterials.2013.6809015
van der Vegte, C. P., Dijkstra, A. G., Knoester, J., & Jansen, T. L. C. (2013). Calculating Two-Dimensional Spectra with the Mixed Quantum-Classical Ehrenfest Method. The Journal of Physical Chemistry A, 117(29), 5970-5980. DOI: 10.1021/jp311668r
Nugroho, B., Iskandar, A., Malyshev, V. A., & Knoester, J. (2013). Bistable optical response of a nanoparticle heterodimer: Mechanism, phase diagram, and switching time. Journal of Chemical Physics, 139(1), 014303-1-014303-8. [014303]. DOI: 10.1063/1.4811181
Vlaming, S. M., Malyshev, V. A., Eisfeld, A., & Knoester, J. (2013). Subdiffusive exciton motion in systems with heavy-tailed disorder. Journal of Chemical Physics, 138(21), 214316-1-214316-10. [214316]. DOI: 10.1063/1.4808155
Compaijen, P. J., Malyshev, V. A., & Knoester, J. (2013). Surface-mediated light transmission in metal nanoparticle chains. Physical Review. B: Condensed Matter and Materials Physics, 87(20), 205437-1-205437-7. [205437]. DOI: 10.1103/PhysRevB.87.205437
Haverkort, F., Stradomska, A., de Vries, A. H., & Knoester, J. (2013). Investigating the Structure of Aggregates of an Amphiphilic Cyanine Dye with Molecular Dynamics Simulations. Journal of Physical Chemistry B, 117(19), 5857-5867. DOI: 10.1021/jp4005696
Tempelaar, R., Vegte, C. P. V. D., Knoester, J., & Jansen, T. L. C. (2013). Surface hopping modeling of two-dimensional spectra. Journal of Chemical Physics, 138(16), 164106-1-164106-10. [164106]. DOI: 10.1063/1.4801519
Broer, W., Palasantzas, G., Knoester, J., & Svetovoy, V. B. (2013). Significance of the Casimir force and surface roughness for actuation dynamics of MEMS. Physical Review. B: Condensed Matter and Materials Physics, 87(12), 125413-1-125413-7. DOI: 10.1103/PhysRevB.87.125413
Liang, C., Louhivuori, M., Marrink, S. J., Jansen, T. L. C., & Knoester, J. (2013). Vibrational Spectra of a Mechanosensitive Channel. JOURNAL OF PHYSICAL CHEMISTRY LETTERS, 4(3), 448-452. DOI: 10.1021/jz3019258
Munarriz, J., Malyshev, A. V., Malyshev, V. A., & Knoester, J. (2013). Optical Nanoantennas with Tunable Radiation Patterns. Nano Letters, 13(2), 444-450. DOI: 10.1021/nl303815a
Tempelaar, R., Stradomska, A., Knoester, J., & Spano, F. C. (2013). Anatomy of an Exciton: Vibrational Distortion and Exciton Coherence in H- and J-Aggregates. Journal of Physical Chemistry B, 117(1), 457-466. DOI: 10.1021/jp310298n

2012

Eisfeld, A., Vlaming, S. M., Moebius, S., Malyshev, V. A., & Knoester, J. (2012). Comment on "Excitons in Molecular Aggregates with Levy-Type Disorder: Anomalous Localization and Exchange Broadening of Optical Spectra" Reply. Physical Review Letters, 109(25), 259702-1-259702-1. [259702]. DOI: 10.1103/PhysRevLett.109.259702
Eisele, D. M., Cone, C. W., Bloemsma, E. A., Vlaming, S. M., van der Kwaak, C. G. F., Silbey, R. J., ... Vanden Bout, D. A. (2012). Utilizing redox-chemistry to elucidate the nature of exciton transitions in supramolecular dye nanotubes. Nature Chemistry, 4(8), 655-662. DOI: 10.1038/NCHEM.1380
Bloemsma, E. A., & Knoester, J. (2012). Photon emission statistics and photon tracking in single-molecule spectroscopy of molecular aggregates: Dimers and trimers. Journal of Chemical Physics, 136(22), 224507-1-224507-14. [224507]. DOI: 10.1063/1.4719210
Liang, C., Knoester, J., & Jansen, T. L. C. (2012). Proton Transport in a Membrane Protein Channel: Two-Dimensional Infrared Spectrum Modeling. Journal of Physical Chemistry B, 116(22), 6336-6345. DOI: 10.1021/jp3019827
Jansen, T. L. C., Dijkstra, A. G., Watson, T. M., Hirst, J. D., & Knoester, J. (2012). Modeling the amide I bands of small peptides (vol 125, 044312, 2006). Journal of Chemical Physics, 136(20), [209901]. DOI: 10.1063/1.4722584
Broer, W., Palasantzas, G., Knoester, J., & Svetovoy, V. B. (2012). Roughness correction to the Casimir force at short separations: Contact distance and extreme value statistics. Physical Review. B: Condensed Matter and Materials Physics, 85(15), [155410]. DOI: 10.1103/PhysRevB.85.155410
Lessing, J., Roy, S., Reppert, M., Baer, M., Marx, D., Jansen, T. L. C., ... Tokmakoff, A. (2012). Identifying Residual Structure in Intrinsically Disordered Systems: A 2D IR Spectroscopic Study of the GVGXPGVG Peptide. Journal of the American Chemical Society, 134(11), 5032-5035. DOI: 10.1021/ja2114135

2011

Roy, S., Lessing, J., Meisl, G., Ganim, Z., Tokmakoff, A., Knoester, J., & Jansen, T. L. C. (2011). Solvent and conformation dependence of amide I vibrations in peptides and proteins containing proline. Journal of Chemical Physics, 135(23), 234507-1-234507-11. [234507]. DOI: 10.1063/1.3665417
Marocico, C. A., & Knoester, J. (2011). Effect of surface-plasmon polaritons on spontaneous emission and intermolecular energy-transfer rates in multilayered geometries. Physical Review A, 84(5), 053824-1-053824-11. [053824]. DOI: 10.1103/PhysRevA.84.053824
Tempelaar, R., Stradomska, A., Knoester, J., & Spano, F. C. (2011). Circularly Polarized Luminescence as a Probe for Long-Range Interactions in Molecular Aggregates. Journal of Physical Chemistry B, 115(36), 10592-10603. DOI: 10.1021/jp2053019
Vlaming, S. M., Bloemsma, E. A., Nietiadi, M. L., & Knoester, J. (2011). Disorder-induced exciton localization and violation of optical selection rules in supramolecular nanotubes. Abstracts of Papers of the American Chemical Society, 242.
Broer, W., Palasantzas, G., Knoester, J., & Svetovoy, V. B. (2011). Roughness correction to the Casimir force beyond perturbation theory. Europhysics Letters, 95(3), 30001-p1-30001-p6. [30001]. DOI: 10.1209/0295-5075/95/30001
Olbrich, C., Jansen, T. L. C., Liebers, J., Aghtar, M., Struempfer, J., Schulten, K., ... Strümpfer, J. (2011). From Atomistic Modeling to Excitation Transfer and Two-Dimensional Spectra of the FMO Light-Harvesting Complex. Journal of Physical Chemistry B, 115(26), 8609-8621. DOI: 10.1021/jp202619a
Chernyak, V. Y., Knoester, J., & Tretiak, S. (2011). Tribute to Shaul Mukamel. Journal of Physical Chemistry B, 115(18), 5037-5038. DOI: 10.1021/jp202931j
Dijkstra, A. G., Jansen, T. L. C., & Knoester, J. (2011). Modeling the Vibrational Dynamics and Nonlinear Infrared Spectra of Coupled Amide I and II Modes in Peptides. Journal of Physical Chemistry B, 115(18), 5392-5401. DOI: 10.1021/jp109431a
Jansen, T. L. C., Dijkstra, A. G., & Knoester, J. (2011). Simulating infrared spectra of the amide-I and amide-II bands of proteins in solution. Abstracts of Papers of the American Chemical Society, 241.
Vlaming, S. M., Bloemsma, E. A., Nietiadi, M. L., & Knoester, J. (2011). Disorder-induced exciton localization and violation of optical selection rules in supramolecular nanotubes. Journal of Chemical Physics, 134(11), 114507-1-114507-11. [114507]. DOI: 10.1063/1.3528993
Liang, C., Jansen, T. L. C., & Knoester, J. (2011). Proton transport in biological systems can be probed by two-dimensional infrared spectroscopy. Journal of Chemical Physics, 134(4), 044502-1-044502-8. [044502]. DOI: 10.1063/1.3522770

2010

Augulis, R., Malyshev, A. V., Malyshev, V. A., Pugzlys, A., Knoester, J., van Loosdrecht, P. H. M., & Pugzlys, A. (2010). Quest for Order in Chaos: Hidden Repulsive Level Statistics in Disordered Quantum Nanoaggregates. JOURNAL OF PHYSICAL CHEMISTRY LETTERS, 1(19), 2911-2916. DOI: 10.1021/jz101003j
Eisfeld, A., Vlaming, S. M., Malyshev, V. A., & Knoester, J. (2010). Excitons in Molecular Aggregates with Lévy-Type Disorder: Anomalous Localization and Exchange Broadening of Optical Spectra. Physical Review Letters, 105(13), 137402-1-137402-4. [137402]. DOI: 10.1103/PhysRevLett.105.137402
Stradomska, A., & Knoester, J. (2010). Shape of the Q band in the absorption spectra of porphyrin nanotubes: Vibronic coupling or exciton effects? Journal of Chemical Physics, 133(9), 094701-1-094701-10. [094701]. DOI: 10.1063/1.3481654
Smith, A. W., Lessing, J., Ganim, Z., Peng, C. S., Tokmakoff, A., Roy, S., ... Knoester, J. (2010). Melting of a beta-Hairpin Peptide Using Isotope-Edited 2D IR Spectroscopy and Simulations. Journal of Physical Chemistry B, 114(34), 10913-10924. DOI: 10.1021/jp104017h
Dijkstra, A. G., Jansen, T. L. C., & Knoester, J. (2010). Two-Dimensional Spectroscopy of Extended Molecular Systems: Applications to Energy Transport and Relaxation in an alpha-Helix. The Journal of Physical Chemistry A, 114(27), 7315-7320. DOI: 10.1021/jp9111124
Roy, S., Jansen, T. L. C., & Knoester, J. (2010). Structural classification of the amide I sites of a beta-hairpin with isotope label 2DIR spectroscopy. Physical Chemistry Chemical Physics, 12(32), 9347-9357. DOI: 10.1039/b925645h
Malyshev, A. V., Malyshev, V. A., & Knoester, J. (2010). CONTROLLING OPTICAL SIGNALS AT THE SUB-WAVELENGTH SCALE: BENT AND Y-SHAPED ARRAYS OF METAL NANO-PARTICLES. In L. Vina, C. Tejedor, & J. M. Calleja (Eds.), 11TH INTERNATIONAL CONFERENCE ON OPTICS OF EXCITONS IN CONFINED SYSTEMS (OECS11) (Journal of Physics Conference Series; Vol. 210). BRISTOL: IOP PUBLISHING LTD.

2009

Eisele, D. M., Knoester, J., Kirstein, S., Rabe, J. P., Vanden Bout, D. A., & Rabe, J. P. (2009). Uniform exciton fluorescence from individual molecular nanotubes immobilized on solid substrates. Nature Nanotechnology, 4(10), 658-663. DOI: 10.1038/nnano.2009.227
Jansen, T. L. C., & Knoester, J. (2009). Waiting Time Dynamics in Two-Dimensional Infrared Spectroscopy. Accounts of Chemical Research, 42(9), 1405-1411. DOI: 10.1021/ar900025a
Marocico, C. A., & Knoester, J. (2009). Intermolecular resonance energy transfer in the presence of a dielectric cylinder. Physical Review A, 79(5), 053816-1-053816-15. [053816]. DOI: 10.1103/PhysRevA.79.053816
Vlaming, S., Malyshev, V. A., & Knoester, J. (2009). Localization properties of one-dimensional Frenkel excitons: Gaussian versus Lorentzian diagonal disorder. Physical Review. B: Condensed Matter and Materials Physics, 79(20), 205121-1-205121-8. [205121]. DOI: 10.1103/PhysRevB.79.205121
Vlaming, S. M., Augulis, R., Stuart, M. C. A., Knoester, J., & van Loosdrecht, P. H. M. (2009). Exciton spectra and the microscopic structure of self-assembled porphyrin nanotubes. Journal of Physical Chemistry B, 113(8), 2273-2283. DOI: 10.1021/jp808235c
Dykstra, T. E., Hennebicq, E., Beljonne, D., Gierschner, J., Claudio, G., Bittner, E. R., ... Scholes, G. D. (2009). Conformational Disorder and Ultrafast Exciton Relaxation in PPV-family Conjugated Polymers. Journal of Physical Chemistry B, 113(3), 656-667. DOI: 10.1021/jp807249b

2008

Bloem, R., Dijkstra, A. G., Jansen, T. L. C., & Knoester, J. (2008). Simulation of vibrational energy transfer in two-dimensional infrared spectroscopy of amide I and amide II modes in solution. Journal of Chemical Physics, 129(5), [055101]. DOI: 10.1063/1.2961020
Malyshev, A., Malyshev, V., & Knoester, J. (2008). Frequency-controlled localization of optical signals in graded plasmonic chains. Nano Letters, 8(8), 2369-2372. DOI: 10.1021/nl8011962
Klugkist, J., Malyshev, V. A., & Knoester, J. (2008). Scaling and universality in the optics of disordered exciton chains. Physical Review Letters, 100(21), 1-4. [216403]. DOI: 10.1103/PhysRevLett.100.216403
Dijkstra, A. G., Jansen, T. L. C., & Knoester, J. (2008). Localization and coherent dynamics of excitons in the two-dimensional optical spectrum of molecular J-aggregates. Journal of Chemical Physics, 128(16), [164511]. DOI: 10.1063/1.2897753
Knoester, J. (2008). PHYS 205-Modeling 2-D infrared spectroscopy of polypeptides and proteins. Abstracts of Papers of the American Chemical Society, 235.
Jansen, T. L. C., & Knoester, J. (2008). Two-dimensional infrared population transfer spectroscopy for enhancing structural markers of proteins. Biophysical Journal, 94(5), 1818-1825. DOI: 10.1529/biophysj.107.118851
Klugkist, J., Malyshev, V., & Knoester, J. (2008). Intrinsic optical bistability of thin films of linear molecular aggregates: The two-exciton approximation. Journal of Chemical Physics, 128(8), [084706]. DOI: 10.1063/1.2832312
Klugkist, J. A., Malyshev, V. A., & Knoester, J. (2008). Selection of dominant multi-exciton transitions in disordered linear J-aggregates. Journal of Luminescence, 128(5-6), 945-947. DOI: 10.1016/j.jlumin.2007.11.052
Vlaming, S. M., Malyshev, V. A., & Knoester, J. (2008). Thermal effects in exciton harvesting in biased one-dimensional systems. Journal of Luminescence, 128(5-6), 956-959. DOI: 10.1016/j.jlumin.2007.11.038

2007

Jansen, T. L. C., & Knoester, J. (2007). Calculation of two-dimensional infrared spectra of ultrafast chemical exchange with numerical Langevin simulations. Journal of Chemical Physics, 127(23), [234502]. DOI: 10.1063/1.2806179
Dijkstra, A. G., Jansen, T. L. C., Bloem, R., & Knoester, J. (2007). Vibrational relaxation in simulated two-dimensional infrared spectra of two amide modes in solution. Journal of Chemical Physics, 127(19), [194505]. DOI: 10.1063/1.2786455
Heijs, D-J., Dijkstra, A. G., & Knoester, J. (2007). Ultrafast pump-probe spectroscopy of linear molecular aggregates: Effects of exciton coherence and thermal dephasing. Chemical Physics, 341(1-3), 230-239. DOI: 10.1016/j.chemphys.2007.06.050
Klugkist, J. A., Malyshev, V. A., & Knoester, J. (2007). Intrinsic optical bistability of thin films of linear molecular aggregates: The one-exciton approximation. Journal of Chemical Physics, 127(16), [164705]. DOI: 10.1063/1.2789416
Vlaming, S. M., Malyshev, V. A., & Knoester, J. (2007). Nonmonotonic energy harvesting efficiency in biased exciton chains. Journal of Chemical Physics, 127(15), 154719: 1-8. [154719]. DOI: 10.1063/1.2784556
Malyshev, A. V., Malyshev, V. A., & Knoester, J. (2007). Probing quantum-mechanical level repulsion in disordered systems by means of time-resolved selectively excited resonance fluorescence. Physical Review Letters, 98(8), [087401]. DOI: 10.1103/PhysRevLett.98.087401

2006

la Cour Jansen, T., & Knoester, J. (2006). Nonadiabatic effects in the two-dimensional infrared spectra of peptides: Application to alanine dipeptide. Journal of Physical Chemistry B, 110(45), 22910-22916. DOI: 10.1021/jp064795t
Pugzlys, A., Augulis, R., van Loosdrecht, P. H. M., Didraga, C., Malyshev, V., Knoester, J., & Pugžlys, A. (2006). Temperature-dependent relaxation of excitons in tubular molecular aggregates: Fluorescence decay and Stokes shift. Journal of Physical Chemistry B, 110(41), 20268-20276. DOI: 10.1021/jp062983d
Didraga, C., Malyshev, V. A., & Knoester, J. (2006). Excitation energy transfer between closely spaced multichromophoric systems: Effects of band mixing and intraband relaxation. Journal of Physical Chemistry B, 110(38), 18818-18827. DOI: 10.1021/jp0569281
Jansen, T. L. C., Dijkstra, A. G., Watson, T. M., Hirst, J. D., & Knoester, J. (2006). Modeling the amide I bands of small peptides. Journal of Chemical Physics, 125(4), art. - 044312. [044312]. DOI: 10.1063/1.2218516
Klugkist, J. A., Mostovoy, M., & Knoester, J. (2006). Mode softening, ferroelectric transition, and tunable photonic band structures in a point-dipole crystal. Physical Review Letters, 96(16), art. - 163903. [163903]. DOI: 10.1103/PhysRevLett.96.163903
Jansen, T. L., & Knoester, J. (2006). A transferable electrostatic map for solvation effects on amide I vibrations and its application to linear and two-dimensional spectroscopy. Journal of Chemical Physics, 124(4), art. - 044502. [044502]. DOI: 10.1063/1.2148409
la Cour Jansen, T., & Knoester, J. (2006). Simulation of two-dimensional infrared spectra by numerical integration of the Schrödinger equation. In Host Publication (Vol. 7B, pp. 1218). Leiden: Martinus Nijhoff/Brill.
Heijs, D. J., Malyshev, V. A., & Knoester, J. (2006). Exciton dephasing and thermal line broadening in molecular aggregates. Journal of Luminescence, 119(4), 271-276. DOI: 10.1016/j.jlumin.2005.12.009
Knoester, J. (2006). Modeling the optical properties of excitons in linear and tubular J-aggregates. International Journal of Photoenergy, 2006(1), [61364]. DOI: 10.1155/IJP/2006/61364
Knoester, J., & Daehne, S. (2006). Prospects of artificial light harvesting systems: An introduction. International Journal of Photoenergy, 2006(36), [54638]. DOI: 10.1155/IJP/2006/54638
Jansen, T. L. C., & Knoester, J. (2006). Simulation of two-dimensional infrared spectra by numerical integration of the schrodinger equation. In T. Simos, & G. Maroulis (Eds.), RECENT PROGRESS IN COMPUTATIONAL SCIENCES AND ENGINEERING, VOLS 7A AND 7B (pp. 1218-1221). (LECTURE SERIES ON COMPUTER AND COMPUTATIONAL SCIENCES; Vol. 7A-B). LEIDEN: VSP BV-C/O BRILL ACAD PUBL.

2005

Heijs, D. J., Malyshev, V. A., & Knoester, J. (2005). Decoherence of excitons in multichromophore systems: Thermal line broadening and destruction of superradiant emission. Physical Review Letters, 95(17), 1-4. [177402]. DOI: 10.1103/PhysRevLett.95.177402
Heijs, D. J., Malyshev, V. A., & Knoester, J. (2005). Thermal broadening of the J-band in disordered linear molecular aggregates: A theoretical study. Journal of Chemical Physics, 123(14), [144507]. DOI: 10.1063/1.2052591
Dijkstra, A. G., & Knoester, J. (2005). Collective oscillations and the linear and two-dimensional infrared spectra of inhomogeneous beta-sheets. Journal of Physical Chemistry B, 109(19), 9787-9798. DOI: 10.1021/jp044141p
Bednarz, M., Malyshev, V. A., & Knoester, J. (2005). Low-temperature spectral dynamics of excitons in molecular aggregates. Journal of Luminescence, 112(1-4), 411-415. DOI: 10.1016/j.jlumin.2004.09.037
Vlaming, S. M., Heijs, D., & Knoester, J. (2005). Transport of optical excitations on dendrimers in the continuum approximation. Journal of Luminescence, 111(4), 349-358. DOI: 10.1016/j.jlumin.2004.10.015
de Dood, M. J. A., Knoester, J., Tip, A., & Polman, A. (2005). Forster transfer and the local optical density of states in erbium-doped silica. Physical Review. B: Condensed Matter and Materials Physics, 71(11), art. - 115102. [115102]. DOI: 10.1103/PhysRevB.71.115102
Pugzlys, A., Hania, R., Didraga, C., Malyshev, V. A., Knoester, J., & Duppen, K. (2005). Ultrafast exciton transport in organic nanotubes. In T. Kobayashi, T. Okada, T. Kobayashi, K. A. Nelson, & S. DeSilvestri (Eds.), Ultrafast phenomena XIV (pp. 879-881). (SPRINGER SERIES IN CHEMICAL PHYSICS; Vol. 79). Berlin: Springer.

2004

Didraga, C., & Knoester, J. (2004). Excitons in tubular molecular aggregates. Journal of Luminescence, 110(4), 239-245. DOI: 10.1016/j.jlumin.2004.08.015
Didraga, C., Pugzlys, A., Hania, P. R., von Berlepsch, H., Duppen, K., Knoester, J., & Pugžlys, A. (2004). Structure, spectroscopy, and microscopic model of tubular carbocyanine dye aggregates. Journal of Physical Chemistry B, 108(39), 14976-14985. DOI: 10.1021/jp048288s
Didraga, C., & Knoester, J. (2004). Chiral exciton wave functions in cylindrical J aggregates. Journal of Chemical Physics, 121(2), 946 - 959. DOI: 10.1063/1.1762874
Demirdoven, N., Cheatum, C. M., Chung, H. S., Khalil, M., Knoester, J., Tokmakoff, A., ... Chung, H. S. (2004). Two-dimensional infrared spectroscopy of antiparallel beta-sheet secondary structure. Journal of the American Chemical Society, 126(25), 7981-7990. DOI: 10.1021/ja049811j
Hoenders, B. J., Doosje, M., & Knoester, J. (2004). Field representation inside arbitrary linear optical media by single surface currents. Optics Communications, 236(4-6), 237-243. DOI: 10.1016/j.optcom.2004.03.048
Cheatum, C. M., Tokmakoff, A., & Knoester, J. (2004). Signatures of beta-sheet secondary structures in linear and two-dimensional infrared spectroscopy. Journal of Chemical Physics, 120(17), 8201-8215. DOI: 10.1063/1.1689637
Bednarz, M., Malyshev, V. A., & Knoester, J. (2004). Low-temperature dynamics of weakly localized Frenkel excitons in disordered linear chains. Journal of Chemical Physics, 120(8), 3827-3840. DOI: 10.1063/1.1643720
Hania, P., Heijs, D. J., Bowden, T., Pugzlys, A., van Esch, J., Knoester, J., & Duppen, K. (2004). Ultrafast energy transport in a first-generation coumarin-tetraphenylporphyrin dendrimer. Journal of Physical Chemistry B, 108(1), 71-81. DOI: 10.1021/jp030586m
Smith, A. W., Cheatum, C. M., Chung, H. S., Demirdoven, N., Khalil, M., Knoester, J., & Tokmakoff, A. (2004). Two-dimensional infrared spectroscopy of beta-sheets and hairpins. Biophysical Journal, 86(1), 619A-619A.
Didraga, C., & Knoester, J. (2004). Optical spectra and localization of excitons in inhomogeneous helical cylindrical aggregates. Journal of Chemical Physics, 121(21), 10687 - 10698. DOI: 10.1063/1.1807825
Heijs, D. J., Malyshev, V. A., & Knoester, J. (2004). Trapping time statistics and efficiency of transport of optical excitations in dendrimers. Journal of Chemical Physics, 121(10), 4884 - 4892. DOI: 10.1063/1.1778136
Pugzlys, A., Hania, P. R., Didraga, C., Knoester, J., & Duppen, K. (2004). Cylindrical aggregates of TDBC: Linear and nonlinear optical properties versus morphology. In S. Janusonis (Ed.), SELF FORMATION THEORY AND APPLICATIONS (pp. 201-206). (SOLID STATE PHENOMENA; Vol. 97-98). ZURICH-UETIKON: TRANS TECH PUBLICATIONS LTD. DOI: 10.4028/www.scientific.net/SSP.97-98.201
Pugzlys, A., Hania, P. R., Didraga, C., Malyshev, V. A., Knoester, J., & Duppen, K. (2004). Ultrafast exciton transport in organic nanotubes. In Ultrafast Processes in Organic Materials The Optical Society of America. DOI: 10.1007/3-540-27213-5_268

2003

Bednarz, M., Malyshev, V., & Knoester, J. (2003). Temperature dependent fluorescence in disordered Frenkel chains: Interplay of equilibration and local band-edge level structure. Physical Review Letters, 91(21), [217401]. DOI: 10.1103/PhysRevLett.91.217401
Markov, R. V., Plekhanov, A. I., Shelkovnikov, V. V., & Knoester, J. (2003). Nonlinear optical properties of one-dimensional organic molecular aggregates in nanometer films. Microelectronic Engineering, 69(2-4), 528-531. DOI: 10.1016/S0167-9317(03)00342-3
Didraga, C., & Knoester, J. (2003). Absorption and dichroism spectra of cylindrical J aggregates and chlorosomes of green bacteria. Journal of Luminescence, 102(21), 60 - 66. [PII S0022-2313(02)00517-3]. DOI: 10.1016/S0022-2313(02)00517-3
Mostovoy, M. V., Khomskii, D. I., Knoester, J., Prokof'ev, N. V., & Prokof’ev, N. V. (2003). Frustrated spin model as a hard-sphere liquid. Physical Review Letters, 90(14), art - 147203. [147203]. DOI: 10.1103/PhysRevLett.90.147203
Hoenders, B. J., Doosje, M., & Knoester, J. (2003). Scattering of light on the surface of photonic crystals. In M. Hrabovsky, D. Senderakova, & P. Tomanek (Eds.), Host Publication (Vol. 5036, pp. 402-406). (PROCEEDINGS OF THE SOCIETY OF PHOTO-OPTICAL INSTRUMENTATION ENGINEERS (SPIE); Vol. 5036). BELLINGHAM: SPIE - INT SOC OPTICAL ENGINEERING.
Knoester, J., & Agranovich, V. M. (2003). Frenkel and charge transfer excitons in organic solids. In Host Publication (pp. 1 - 96). Amsterdam: Elsevier.
Markov, R. V., Plekhanov, A. I., Ivanova, Z. M., Shelkovnikov, V. V., & Knoester, J. (2003). Nonlinear-optical properties of self-assembled molecular J-aggregates of pseudoisocyanine in nanometer films. In Host Publication (pp. 279 - 290). Amsterdam: Kluwer Academic Publishers.
Hoenders, B. J., Doosje, M., & Knoester, J. (2003). Scattering of light in photonic crystals. In G. C. Righini, & A. Consortini (Eds.), OPTICS FOR THE QUALITY OF LIFE, PTS 1 AND 2 (pp. 749-749). (PROCEEDINGS OF THE SOCIETY OF PHOTO-OPTICAL INSTRUMENTATION ENGINEERS (SPIE); Vol. 4829). BELLINGHAM: SPIE - INT SOC OPTICAL ENGINEERING.

2002

Bakalis, L. D., Rubtsov, I., & Knoester, J. (2002). Absorption spectra of mixed two-dimensional cyanine aggregates on silver halide substrates. Journal of Chemical Physics, 117(11), 5393-5403. DOI: 10.1063/1.1499958
Lampoura, S. S., Spitz, C., Dähne, S., Knoester, J., Duppen, K., & Dahne, S. (2002). The Optical Dynamics of Excitons in Cylindrical J-Aggregates. The Journal of Physical Chemistry. B: Materials, Surfaces, Interfaces, & Biophysical, 106(12), 3103 - 3111. DOI: 10.1021/jp013496v
Bogdanov, A. A., Zaitsev, A. I., Knoester, J., Malyshev, V., & Ryzhov, I. V. (2002). Bistable optical response of an ultrathin glassy film consisting of oriented molecular aggregates. Izvestiya Akademii Nauk Seriya Fizicheskaya, 66(3), 333-336.
Mostovoy, M. V., Khomskii, D. I., & Knoester, J. (2002). Coupled spin-charge dynamics in NaV2O5 and its effect on the optical absorption. Physical Review B, 65(6), art - 064412. [064412]. DOI: 10.1103/PhysRevB.65.064412
Didraga, C., & Knoester, J. (2002). Exchange narrowing in circular and cylindrical molecular aggregates: degenerate versus nondegenerate states. Chemical Physics, 275(1-3), 307-318. DOI: 10.1016/S0301-0104(01)00514-6
Bednarz, M., Malyshev, V., & Knoester, J. (2002). Temperature dependence of the fluorenscence lifetime of weakly localized Frenkel excitons in molecular aggregates. In Host Publication (pp. 553-560). Amsterdam: IOS Press.
Knoester, J. (2002). Optical properties of molecular aggregates. In Host Publication (pp. 149 - 186). Amsterdam: IOS Press.
Doosje, M., Hoenders, B. J., & Knoester, J. (2002). Scattering of light on the surfaces of photonic crystals. Optics Communications, 206(4-6), 253 - 258. [PII S0030-4018(02)01452-9]. DOI: 10.1016/S0030-4018(02)01452-9
Figge, M. T., Mostovoy, M. V., & Knoester, J. (2002). Peierls instability due to the interaction of electrons with both acoustic and optical phonons in metallic carbon nanotubes. Physical Review B, 65(12), art - 125416. [125416]. DOI: 10.1103/PhysRevB.65.125416
Hoenders, B. J., Doosje, M., & Knoester, J. (2002). Scattering of light by photonic crystals. Acta Physica Polonica A, 101(1), 133-146.
Mostovoy, M., Antonsen, F., & Knoester, J. (2002). Optical excitation of electron-hole pairs in disordered one-dimensional semiconductors. Physical Review B, 65(15), [155210]. DOI: 10.1103/PhysRevB.65.155210
Spitz, C., Knoester, J., Ouart, A., & Daehne, S. (2002). Polarized absorption and anomalous temperature dependence of fluorescence depolarization in cylindrical J-aggregates. Chemical Physics, 275(1-3), 271 - 284. DOI: 10.1016/S0301-0104(01)00521-3
Didraga, C., Klugkist, J. A., & Knoester, J. (2002). Optical Properties of Helical Cylindrical Molecular Aggregates: The Homogeneous Limit. The Journal of Physical Chemistry B, 106(44), 11474 - 11486. DOI: 10.1021/jp026217s
Bednarz, M., Malyshev, V. A., & Knoester, J. (2002). Intraband relaxation and temperature dependence of the fluorescence decay time of one-dimensional Frenkel excitons: The Pauli master equation approach. The Journal of Chemical Physics, 117(13), 6200 - 6213. DOI: 10.1063/1.1499483

2001

Bogdanov, A., Ryzhov, I. V., Zaitsev, A. I., Malyshev, V., & Knoester, J. (2001). Bistable optical response of an ultrathin glassy film consisting of oriented molecular aggregates. In Host Publication (pp. 325 - 332). SPIE - INT SOC OPTICAL ENGINEERING.
Mostovoy, M. V., Khomskii, D. I., Knoester, J., & Prokof'ev, N. V. (2001). Frustrated quantum Ising model and charged kinks. In Host Publication (pp. 311 - 316). Amsterdam: Kluwer.
Bednarz, M., Malyshev, V., Lemaistre, J. P., & Knoester, J. (2001). Disorder-induced temperature dependence of the radiative lifetime of Frenkel excitons in molecular aggregates. Journal of Luminescence, 94(6), 271 - 274. DOI: 10.1016/S0022-2313(01)00297-6
Figge, M. T., Mostovoy, M. V., & Knoester, J. (2001). Peierls transition with acoustic phonons and solitwistons in carbon nanotubes. Physical Review Letters, 86(20), 4572 - 4575. DOI: 10.1103/PhysRevLett.86.4572
Mostovoy, M. V., Khomskii, D. I., & Knoester, J. (2001). NaV2O5:: An exotic exciton system. International Journal of Modern Physics B, 15(28-30), 3732-3736.
Bednarz, M., & Knoester, J. (2001). The Linear Absorption and Pump-Probe Spectra of Cylindrical Molecular Aggregates. The Journal of Physical Chemistry B, 105(51), 12913 - 12923. DOI: 10.1021/jp012371n
Ryzhov, I. V., Kozlov, G. G., Malyshev, V., & Knoester, J. (2001). Low-temperature kinetics of exciton–exciton annihilation of weakly localized one-dimensional Frenkel excitons. Journal of Chemical Physics, 114(12), 5322-5329. DOI: 10.1063/1.1352080
Mostovoy, M. V., Khomskii, D. I., & Knoester, J. (2001). NaV2O5: An Exotic Exciton System. In K. Cho, & A. Matsui (Eds.), Proceedings Of The 2000 International Conference On Excitonic Processes In Condensed Matter (20 ed., Vol. 86, pp. 164-168). SINGAPORE: World Scientific Publishing. Excitonic Processes in Condensed Matter - Proceedings of 2000 International Conference, DOI: 10.1142/9789812811387_0037

2000

Rubtsov, I. V., Ebina, K., Yoshihara, K., Knoester, J., Suzumoto, T., & Tani, T. (2000). Spectral sensitization, supersentitization and ultrafast exciton trapping on AgBr semiconductor surfaces. In Host Publication (pp. 444 - 446). Berlin: Springer.
Bakalis, L. D., & Knoester, J. (2000). Linear absorption as a tool to measure the exciton delocalization length in molecular assemblies. Journal of Luminescence, 87(3), 66 - 70. DOI: 10.1016/S0022-2313(99)00231-8
Doosje, M., Hoenders, B. J., & Knoester, J. (2000). Photonic bandgap optimization in inverted fcc photonic crystals. Journal of the Optical Society of America B-Optical Physics, 17(4), 600 - 606. DOI: 10.1364/JOSAB.17.000600
Markov, R. V., Plekhanov, A. I., Shelkovnikov, V. V., & Knoester, J. (2000). Giant nonlinear optical response of interacting one-dimensional Frenkel excitons in molecular aggregates. Physica Status Solidi B-Basic Research, 221(1), 529 - 533. DOI: 10.1002/1521-3951(200009)221:1<529::AID-PSSB529>3.0.CO;2-A
Markov, R. V., Chubakov, P. A., Plekhanov, A. I., Ivanova, Z. M., Orlova, N. A., Gerasimova, T. N., ... Knoester, J. (2000). Optical and nonlinear optical properties of low-dimensional aggregates of amphiphylic cyanine dyes. Nonlinear Optics, 25, 365 - 371.
Mostovoy, M. V., & Knoester, J. (2000). Statistics of optical spectra from single-ring aggregates and its application to LH2. Journal of Physical Chemistry B, 104(51), 12355 - 12364. DOI: 10.1021/jp001519k
Doosje, M., Hoenders, B. J., & Knoester, J. (2000). Photonic band-gap optimisation in inverted FCC photonic crystals. In D. Lenstra, T. D. Visser, & K. A. H. Leeuwen (Eds.), QUANTUM OPTICS OF SMALL STRUCTURES (pp. 17-22). (KONINKLIJKE NEDERLANDSE AKADEMIE VAN WETENSCHAPPEN, VERHANDELINGEN; Vol. 51). AMSTERDAM: Royal Netherlands Academy of Arts and Sciences (KNAW).
Juzeliūnas, G., & Knoester, J. (2000). Pump–probe spectrum of molecular assemblies of arbitrary structure and dimension. Journal of Chemical Physics, 112(5), 2325-2338. DOI: 10.1063/1.480798

1999

Bakalis, L. D., & Knoester, J. (1999). Can the exciton delocalization length in molecular aggregates be determined by pump-probe spectroscopy? Journal of Luminescence, 83/84(4), 115-119. DOI: 10.1016/S0022-2313(99)00083-6
Figge, M. T., Mostovoy, M., & Knoester, J. (1999). Magnetic susceptibility due to disorder-induced neutral solitons in interacting polymer chains. Physical Review B, 59(21), 13882-13891. DOI: 10.1103/PhysRevB.59.13882
Bakalis, L. D., Coca, M., & Knoester, J. (1999). Optical line shapes of dynamically disordered ring aggregates. Journal of Chemical Physics, 110(4), 2208-2218. DOI: 10.1063/1.477833
Bakalis, L. D., & Knoester, J. (1999). Can the Exciton Delocalization Lenght in Molecular Aggregates be Determined by Pump-Probe Spectroscopy. Journal of Statistical Physics, 83 / 84, 115 - 119.
Mostovoy, M., & Knoester, J. (1999). Instanton calculation of the density of states of disordered Peierls chains. International Journal of Modern Physics B, 13(13), 1601-1618. DOI: 10.1142/S0217979299001594
Bakalis, L. D., & Knoester, J. (1999). Pump-Probe Spectroscopy and the Exciton Delocalization Lenght in Molecular Aggregates. Journal of Physical Chemistry, B103, 6620 - 6628.
Bakalis, L. D., & Knoester, J. (1999). Pump-Probe Spectroscopy and the Exciton Delocalization Length in Molecular Aggregates. Journal of Physical Chemistry, B103(31), 6620 - 6628. DOI: 10.1021/jp990354g
Figge, M. T., Mostovoy, M. V., & Knöster, J. (1999). Disorder-induced neutral solitons in degenerate ground state polymers. Synthetic Metals, 101(1-3), 388 - 389. DOI: 10.1016/S0379-6779(98)00827-3
Knoester, J., & Mostovoy, M. V. (1999). Disorder and solitons in trans-polyacetylene. In Host Publication (pp. 63 - 85). Weinheim: VCH.

1998

Mostovoy, M., Khomskii, D., & Knoester, J. (1998). Phase diagram of disordered spin-Peierls systems. Physical Review B, 58(13), 8190 - 8193. DOI: 10.1103/PhysRevB.58.8190
Figge, M. T., Mostovoy, M. V., & Knoester, J. (1998). Critical temperature and density of spin flips in the anisotropic random-field Ising model. Physical Review B, 58(5), 2626 - 2634. DOI: 10.1103/PhysRevB.58.2626
Wubs, M., & Knoester, J. (1998). Exchange narrowing in dynamically disordered molecular aggregates. Chemical Physics Letters, 284(1-2), 63-70. DOI: 10.1016/S0009-2614(97)01367-5
Mostovoy, M. V., Figge, M. T., & Knoester, J. (1998). Density of neutral solitons in weakly disordered Peierls chains. Physical Review B, 57(5), 2861 - 2871. DOI: 10.1103/PhysRevB.57.2861
Wubs, M., & Knoester, J. (1998). Optical absorption of molecular aggregates with colored noise. Journal of Luminescence, 76(1), 359 - 364. DOI: 10.1016/S0022-2313(97)00156-7

1997

Mostovoy, M. V., & Knoester, J. (1997). Instanton in disordered Peierls systems. Physics Letters A, 235(5), 535-539. DOI: 10.1016/S0375-9601(97)00664-6
Bakalis, L. D., & Knoester, J. (1997). Optical properties of one-dimensional exciton systems: Beyond the Heitler-London approximation. Journal of Chemical Physics, 106(17), 6964-6976. DOI: 10.1063/1.473676
Mostovoy, M. V., Figge, M. T., & Knoester, J. (1997). Disorder-induced solitons in conjugated polymers. Europhysics Letters, 38(9), 687. DOI: 10.1209/epl/i1997-00105-4

1996

Mostovoy, M. V., & Knoester, J. (1996). Quantum lattice motion and optical absorption in conjugated polymers: adiabatic theory. Physical Review B, 53(18), [12057]. DOI: 10.1103/PhysRevB.53.12057
Mostovoy, M. V., & Knoester, J. (1996). Quantum lattice motion and optical absorption in conjugated polymers: nonadiabatic theory. Physical Review B, 54(14), [9784 ]. DOI: 10.1103/PhysRevB.54.9784
Knoester, J., & Spano, F. C. (1996). Theory of pump-probe spectroscopy of molecular J-aggregates. In Host Publication (pp. 111 - 160). World Scientific Publishing.

1995

Mostovoy, M. V., & Knoester, J. (1995). Subgap optical absorption in conjugated polymers. Journal of Luminescence, 66-7(1-6), 365-369. DOI: 10.1016/0022-2313(95)00171-9
Knoester, J. (1995). Collective nonlinear optical properties of disordered J aggregates. Advanced Materials, 7(5), 500-502. DOI: 10.1002/adma.19950070523
Knoester, J. (1995). Nonlinear optical response of molecular J aggregates in the motional narrowing limit. Japanese Journal of Applied Physics, 34, 275.
Knoester, J. (1995). Nonlinear Optical Response of Disordered J Aggregates in the Motional Narrowing Limit. Japanese journal of applied physics part 2-Letters, 34, 275-278.
Knoester, J., & Spano, F. C. (1995). Unusual Behavior of two-photon absorption from three-level molecules in a one-dimensional lattice. Physical Review Letters, 74(14). DOI: 10.1103/PhysRevLett.74.2780

1994

DURRANT, . N. V., KNOESTER, J., & WIERSMA, D. A. (1994). LOCAL ENERGETIC DISORDER IN MOLECULAR AGGREGATES PROBED BY THE ONE-EXCITON TO 2-EXCITON TRANSITION. Chemical Physics Letters, 222(5), 450-456.
Knoester, J. (1994). Pump-probe spectroscopy of J-aggregates: a way to measure intermolecular correlations in the frequency disorder. Journal of Luminescence, 58(1-6), 107-112. DOI: 10.1016/0022-2313(94)90372-7
Durrant, J., Wiersma, D. A., & Knoester, J. (1994). Nonlinear spectroscopy as a probe for correlated frequency disorder. In Proceedings of 5th European Quantum Electronics Conference, 1994 (pp. 107-108). University of Groningen, The Zernike Institute for Advanced Materials.
Durrant, J. R., Knoester, J., & Wiersma, D. A. (1994). Local energetic disorder in molecular aggregates probed by the one-exciton to two-exciton transition. Chemical Physics Letters, 222(5). DOI: 10.1016/0009-2614(94)00379-3

1993

Knoester, J. (1993). Nonlinear optical line shapes of disordered molecular aggregates: Motional narrowing and the effect of intersite correlations. The Journal of Chemical Physics, 99(11), 8466-8479. DOI: 10.1063/1.465623
Fidder, H., Knoester, J., & Wiersma, D. A. (1993). Observation of the one-exciton to two-exciton transition in a J aggregate. The Journal of Chemical Physics, 98(8), 6564-6566. DOI: 10.1063/1.464797
Knoester, J. (1993). Nonlinear optical susceptibilities of disordered aggregates: A comparison of schemes to account for intermolecular interactions. Physical Review A, 47(3), 2083-2098. DOI: 10.1103/PhysRevA.47.2083
KNOESTER, J. (1993). 3RD-ORDER OPTICAL-RESPONSE OF MOLECULAR AGGREGATES - DISORDER AND THE BREAKDOWN OF SIZE-ENHANCEMENT. Chemical Physics Letters, 203(4), 371-377.
Knoester, J. (1993). Third-order optical response of molecular aggregates. Disorder and the breakdown of size-enhancement. Chemical Physics Letters, 203(4). DOI: 10.1016/0009-2614(93)85583-A

1992

Knoester, J. (1992). Exciton superradiance in molecular crystal slabs. Journal of Luminescence, 53(1-6), 101-104. DOI: 10.1016/0022-2313(92)90116-Q
Knoester, J. (1992). Optical dynamics in crystal slabs: crossover from superradiant excitons to bulk polaritons. Physical Review Letters, 68(5), 654-657. DOI: 10.1103/PhysRevLett.68.654

1991

Fidder, H., Knoester, J., & Wiersma, D. A. (1991). Optical properties of disordered molecular aggregates: a numerical study. The Journal of Chemical Physics, 95(11), 7880-7890. DOI: 10.1063/1.461317
KNOESTER, J., & MUKAMEL, S. (1991). TRANSIENT GRATINGS, 4-WAVE-MIXING AND POLARITON EFFECTS IN NONLINEAR OPTICS. Physics Reports-Review Section of Physics Letters, 205(1), 1-58.
Knoester, J. (1991). THE TRANSIENT GRATING AS A PROBE FOR POLARITON DYNAMICS. Journal of Luminescence, 48-9(5), 152-156. DOI: 10.1016/0022-2313(91)90095-D
Knoester, J., & Mukamel, S. (1991). Transient Gratings, Four-Wave Mixing and Polariton Effects in Nonlinear Optics. Physics Reports, 205(1). DOI: 10.1016/0370-1573(91)90051-M

1990

FIDDER, H., KNOESTER, J., & WIERSMA, D. A. (1990). SUPERRADIANT EMISSION AND OPTICAL DEPHASING IN J-AGGREGATES. Chemical Physics Letters, 171(5-6), 529-536. DOI: 10.1016/0009-2614(90)85258-E
Knoester, J., & Mukamel, S. (1990). Susceptibilities, local field, and polaritons in nonlinear optics: A unifying theory. Journal of Luminescence, 45(1-6), 266-268. DOI: 10.1016/0022-2313(90)90165-8
Knoester, J., & Mukamel, S. (1990). Nonlinear optical response in condensed phases: A microscopic theory using the multipolar Hamiltonian. Physical Review A, 41(7). DOI: 10.1103/PhysRevA.41.3812

1989

Knoester, J., & Mukamel, S. (1989). Polaritons and retarded interactions in nonlinear optical susceptibilities. The Journal of Chemical Physics, 91(2), 989-1007. DOI: 10.1063/1.457150
Knoester, J., & Mukamel, S. (1989). Intermolecular interactions in linear and nonlinear susceptibilities: beyond the local-field approximation. Journal of the Optical Society of America B, 6(4). DOI: 10.1364/JOSAB.6.000643
Knoester, J., & Mukamel, S. (1989). Nonlinear optics using the multipolar Hamiltonian: The Bloch-Maxwell equations and local fields. Physical Review A, 39(4). DOI: 10.1103/PhysRevA.39.1899
Knoester, J., & Mukamel, S. (1989). Intermolecular forces, spontaneous emission, and superradiance in a dielectric medium: Polariton-mediated interactions. Physical Review A, 40(12). DOI: 10.1103/PhysRevA.40.7065

1987

Knoester, J., & Van Himbergen, J. E. (1987). Inclusion of the Förster-rate orientation factor into the theory of concentration self-quenching by statistical traps. Journal of Chemical Physics, 86(8), 4438-4441. DOI: 10.1063/1.452716
Knoester, J., & Van Himbergen, J. E. (1987). On the theory of concentration self-quenching by statistical traps. The Journal of Chemical Physics, 86(6), 3571-3576. DOI: 10.1063/1.451961
Knoester, J., & Van Himbergen, J. E. (1987). Monte Carlo simulations on concentration self-quenching by statistical traps. The Journal of Chemical Physics, 86(6), 3577-3582. DOI: 10.1063/1.451962

1986

Knoester, J., & Van Himbergen, J. E. (1986). Theory of concentration depolarization in the presence of orientational correlations. The Journal of Chemical Physics, 84(6), 2990-2997. DOI: 10.1063/1.450833

1985

KNOESTER, J., & VANHIMBERGEN, J. E. (1985). CONCENTRATION DEPOLARIZATION IN THE PRESENCE OF ORIENTATIONAL CORRELATIONS. Journal de physique, 46(C-7), 67-71.

1984

Knoester, J., & Van Himbergen, J. E. (1984). Excitation decay due to incoherent energy transfer: A comparative study by means of an exact density expansion. The Journal of Chemical Physics, 80(9), 4200-4203. DOI: 10.1063/1.447250
Knoester, J., & Van Himbergen, J. E. (1984). Effect of molecular reorientation on excitation decay due to incoherent energy transfer. The Journal of Chemical Physics, 81(10), 4380-4388. DOI: 10.1063/1.447404

1983

Arciszewski, H. F. R., & Knoester, J. (1983). A New Method for the Correction of γ-γ Correlation Matrices. Nuclear Instruments And Methods In Physics Research, 215(1). DOI: 10.1016/0167-5087(83)91314-5
Laatst gewijzigd:13 oktober 2015 15:54