Publications
2025
Kosir,
T., Das, H., Pedersen, M. P., Richard, A.-K.,
Anteghini, M., Martins Dos Santos, V., Oeljeklaus, S., van
der Klei, I. J., & Warscheid, B. (2025).
Integrative Omics reveals changes in the cellular landscape
of peroxisome-deficient pex3 yeast cells.
Microbial Cell, 12(1), 9-33. https://doi.org/10.15698/mic2025.02.842
2024
Zerbes,
R. M., Colina-Tenorio, L., Bohnert, M., von der Malsburg, K.,
Peikert, C. D., Mehnert, C. S., Perschil, I., Klar, R. F. U.,
de Boer, R., Kram, A., van der Klei,
I., Oeljeklaus, S., Warscheid, B., Rampelt, H., & van
der Laan, M. (2025). Coordination of cytochrome bc1 complex
assembly at MICOS. Embo Reports,
26, 353-384. https://doi.org/10.1038/s44319-024-00336-x
Chen,
H., de Boer, R., Krikken, A.
M., Wu, F., & van der Klei, I.
(2024). Hansenula polymorpha cells lacking the ER-localized
peroxins Pex23 or Pex29 show defects in mitochondrial function and
morphology. Open Biology,
13(5), Article bio060271. https://doi.org/10.1242/bio.060271
Jansen,
R. L. M., de Boer, R., de Lange, E. M.
F., Koster, J., Vlijm, R., Waterham, H.
R., & van der Klei, I. J. (2024).
Overexpression of PEX14 results in mistargeting to
mitochondria, accompanied by organelle fragmentation and clustering
in human embryonic kidney cells. Biochimica et
Biophysica Acta - Molecular Cell Research,
1871(6), Article 119754. https://doi.org/10.1016/j.bbamcr.2024.119754
de
Lange, E. M. F., Mol, F. N., van der
Klei, I. J., & Vlijm, R. (2024). STED
super-resolution microscopy unveils the dynamics of Atg30 on yeast
Pex3-labeled peroxisomes. Iscience,
27(8), Article 110481. https://doi.org/10.1016/j.isci.2024.110481
Pedersen,
M. P., Wolters, J. C., de Boer,
R., Krikken, A. M., & van der Klei,
I. J. (2024). The Hansenula polymorpha mitochondrial
carrier family protein Mir1 is dually localized at peroxisomes and
mitochondria. Biochimica et Biophysica Acta -
Molecular Cell Research, 1871(5), Article
119742. https://doi.org/10.1016/j.bbamcr.2024.119742
2023
de
Boer, R., & van der Klei, I. J. (2023).
Correlative Light- and Electron Microscopy in Peroxisome
Research. In M. Schrader (Ed.), Peroxisomes: Methods and
protocols (2nd ed., pp. 93-104). (Methods in molecular biology
(Clifton, N.J.); Vol. 2643). Humana Press. https://doi.org/10.1007/978-1-0716-3048-8_7
Wu,
F., de Boer, R., & van der Klei, I.
J. (2023). Gluing yeast peroxisomes - composition and
function of membrane contact sites. Journal of
Cell Science, 136(11), Article 259440. https://doi.org/10.1242/jcs.259440
Jansen,
R. L. M., van den Noort, M., Krikken, A.
M., Bibi, C., Böhm, A., Schuldiner, M., Zalckvar,
E., & van der Klei, I. J. (2023). Novel
targeting assay uncovers targeting information within peroxisomal
ABC transporter Pxa1. Biochimica et Biophysica
Acta - Molecular Cell Research, 1870(5),
Article 119471. https://doi.org/10.1016/j.bbamcr.2023.119471
2022
Rampelt,
H., Wollweber, F., Licheva, M., de Boer, R., Perschil,
I., Steidle, L., Becker, T., Bohnert, M., van der Klei,
I., Kraft, C., van der Laan, M., & Pfanner, N. (2022).
Dual role of Mic10 in mitochondrial cristae organization and
ATP synthase-linked metabolic adaptation and respiratory
growth. Cell reports, 38(4),
Article 110290. https://doi.org/10.1016/j.celrep.2021.110290
Wu,
F., & van der Klei, I. J. (2022).
Structure-function analysis of the ER-peroxisome contact site
protein Pex32. Frontiers in Cell and Developmental
Biology, 10, Article 957871. https://doi.org/10.3389/fcell.2022.957871
Yuan,
W., Akşit, A., de Boer, R., Krikken, A.
M., & van der Klei, I. J. (2022).
Yeast Vps13 is Crucial for Peroxisome Expansion in Cells With
Reduced Peroxisome-ER Contact Sites. Frontiers in
Cell and Developmental Biology, 10, Article
842285. https://doi.org/10.3389/fcell.2022.842285
2021
Jansen,
R. L. M., Santana-Molina, C., van den Noort,
M., Devos, D. P., & van der Klei, I. J.
(2021). Comparative Genomics of Peroxisome Biogenesis
Proteins: Making Sense of the PEX Proteins.
Frontiers in Cell and Developmental Biology,
9, Article 654163. https://doi.org/10.3389/fcell.2021.654163
2020
Zielińska,
A., Savietto, A., de Sousa Borges, A., Martinez, D., Berbon,
M., Roelofsen, J. R., Hartman, A. M., de Boer,
R., Van der Klei, I. J., Hirsch, A.
K., Habenstein, B., Bramkamp, M., & Scheffers,
D.-J. (2020). Flotillin-mediated membrane fluidity
controls peptidoglycan synthesis and MreB movement.
eLife, 9, 1-21. Article e57179. https://doi.org/10.7554/eLife.57179
Singh,
R., Wróblewska, J., de Boer, R., & van
der Klei, I. J. (2020). Hansenula Polymorpha
Vac8: A Vacuolar Membrane Protein Required for Vacuole
Inheritance and Nucleus-Vacuole Junction Formation.
Contact, 3, 1-8. https://doi.org/10.1177/2515256420974928
Krikken,
A. M., Wu, H., de Boer, R., Devos,
D. P., Levine, T. P., & van der Klei, I. J.
(2020). Peroxisome retention involves Inp1-dependent
peroxisome-plasma membrane contact sites in yeast.
The Journal of Cell Biology,
219(10), Article e201906023. https://doi.org/10.1083/jcb.201906023
Wu,
F., de Boer, R., Krikken, A. M.,
Akşit, A., Bordin, N., Devos, D. P., & van der Klei,
I. J. (2020). Pex24 and Pex32 are required to tether
peroxisomes to the ER for organelle biogenesis, positioning and
segregation in yeast. Journal of Cell
Science, 133(16), Article jcs.246983. https://doi.org/10.1242/jcs.246983
2019
Singh,
R., Manivannan, S., Krikken, A. M., de Boer,
R., Bordin, N., Devos, D. P., & van der Klei, I.
J. (2020). Hansenula polymorpha Pex37 is a peroxisomal
membrane protein required for organelle fission and
segregation. The FEBS Journal,
287(9), 1742-1757. https://doi.org/10.1111/febs.15123
Wu,
H., & van der Klei, I. J. (2019).
Novel Peroxisome–Vacuole Contacts in Yeast.
Contact, 2, 1-3. https://doi.org/10.1177/2515256419829623
Wu,
H., de Boer, R., Krikken, A. M.,
Akşit, A., Yuan, W., & van der Klei, I. J.
(2019). Peroxisome development in yeast is associated with
the formation of Pex3-dependent peroxisome-vacuole contact
sites. Biochimica et Biophysica Acta (BBA) -
Molecular Cell Research, 1866(3), 349-359. https://doi.org/10.1016/j.bbamcr.2018.08.021
Wróblewska,
J. P., & van der Klei, I. J. (2019).
Peroxisome Maintenance Depends on De Novo Peroxisome
Formation in Yeast Mutants Defective in Peroxisome Fission and
Inheritance. International Journal of Molecular
Sciences, 20(16), Article 4023. https://doi.org/10.3390/ijms20164023
Costello,
J. L., Zalckvar, E., Kemp, S., di Cara, F., Kim, P. K., Linka,
N., & van der Klei, I. J. (2019).
Peroxisomes: New insights into protein sorting, dynamics,
quality control, signalling and roles in health and disease.
Histochemistry and cell biology,
151(4), 283-289. https://doi.org/10.1007/s00418-019-01780-w
Jansen,
R. L. M., & van der Klei, I. J. (2019).
The peroxisome biogenesis factors Pex3 and Pex19:
Multitasking proteins with disputed functions.
FEBS Letters, 593(5), 457-474. https://doi.org/10.1002/1873-3468.13340
2018
Rampelt,
H., Wollweber, F., Gerke, C., de Boer, R., van
der Klei, I. J., Bohnert, M., Pfanner, N., & van der
Laan, M. (2018). Assembly of the Mitochondrial Cristae
Organizer Mic10 is Regulated by Mic26-Mic27 Antagonism and
Cardiolipin. Journal of Molecular
Biology, 430(13), 1883-1890. https://doi.org/10.1016/j.jmb.2018.04.037
Aksit,
A., & van der Klei, I. J. (2018). Yeast
peroxisomes: How are they formed and how do they grow?
International journal of biochemistry & cell
biology, 105, 24-34. https://doi.org/10.1016/j.biocel.2018.09.019
2017
Kumar,
S., de Boer, R., & van der Klei, I.
J. (2018). Yeast cells contain a heterogeneous
population of peroxisomes that segregate asymmetrically during cell
division. Journal of Cell Science,
131(3), Article jcs.207522. https://doi.org/10.1242/jcs.207522
van
der Klei, I., & Veenhuis, M. (2017). Microscopes:
Essential instruments in microbiology research. In J. van
Doorn, J. Luirink, J. van der Oost, B. Oudega, L. Robertson, H.
Smit, P. Willemsen, & C. Biemans (Eds.), Mighty microbes:
the amazing world of microorganisms (1 ed., Vol. 1, pp.
41-44). Microcanon Foundation.
Wroblewska,
J. P., Cruz-Zaragoza, L. D., Yuan, W., Schummer, A., Chuartzman, S.
G., de Boer, R., Oeljeklaus, S., Schuldiner, M.,
Zalckvar, E., Warscheid, B., Erdmann, R., & van der Klei,
I. J. (2017). Saccharomyces cerevisiae cells lacking
Pex3 contain membrane vesicles that harbor a subset of peroxisomal
membrane proteins. Biochimica et Biophysica Acta -
Molecular Cell Research, 1864(10), 1656-1667.
Article bbamcr.2017.05.021. https://doi.org/10.1016/j.bbamcr.2017.05.021
2016
Kawalek,
A., Jagadeesan, C., & van der Klei, I. J. (2016).
Impaired biosynthesis of the non-bilayer lipids
phosphatidylethanolamine or cardiolipin does not affect peroxisome
biogenesis and proliferation in Saccharomyces cerevisiae.
Biochemical and Biophysical Research
Communications, 480(2), 228-233. https://doi.org/10.1016/j.bbrc.2016.10.033
2015
Kumar,
S., Singh, R., Williams, C. P., & van der Klei, I.
J. (2016). Stress exposure results in increased
peroxisomal levels of yeast Pnc1 and Gpd1, which are imported via a
piggy-backing mechanism. Biochimica et Biophysica
Acta-Molecular Cell Research, 1863(1),
148-156. https://doi.org/10.1016/j.bbamcr.2015.10.017
Yuan,
W., Veenhuis, M., & van der Klei, I. J. (2016).
The birth of yeast peroxisomes. Biochimica
et biophysica acta, 1863(5), 902-910. Article
17661. https://doi.org/10.1016/j.bbamcr.2015.09.008
Bohnert,
M., Zerbes, R. M., Davies, K. M., Mühleip, A. W., Rampelt, H.,
Horvath, S. E., Boenke, T., Kram, A., Perschil, I.,
Veenhuis, M., Kühlbrandt, W., van der Klei, I.
J., Pfanner, N., & van der Laan, M. (2015).
Central role of mic10 in the mitochondrial contact site and
cristae organizing system. Cell
Metabolism, 21(5), 747-755. https://doi.org/10.1016/j.cmet.2015.04.007
Lefevre,
S. D., Kumar, S., & van der Klei, I. J. (2015).
Inhibition of peroxisome fission, but not mitochondrial
fission, increases yeast chronological lifespan.
Cell Cycle, 14(11), 1698-1703. https://doi.org/10.1080/15384101.2015.1029685
Thomas,
A. S., Krikken, A. M., van der Klei, I.
J., & Williams, C. P. (2015). Phosphorylation of
Pex11p does not regulate peroxisomal fission in the yeast Hansenula
polymorpha. Scientific Reports,
5, 1-11. Article 11493. https://doi.org/10.1038/srep11493
Williams,
C., Opalinski, L., Landgraf, C., Costello, J., Schrader, M.,
Krikken, A. M., Knoops, K., Kram, A. M.,
Volkmer, R., & van der Klei, I. J. (2015).
The membrane remodeling protein Pex11p activates the GTPase
Dnm1p during peroxisomal fission. Proceedings of
the National Academy of Sciences of the United States of
America, 112(20), 6377-6382. https://doi.org/10.1073/pnas.1418736112
Knoops,
K., de Boer, R., Kram, A., &
van der Klei, I. J. (2015). Yeast pex1 cells contain
peroxisomal ghosts that import matrix proteins upon reintroduction
of Pex1. The Journal of Cell Biology,
211(5), 955-962. https://doi.org/10.1083/jcb.201506059
2014
Veenhuis,
M., & van der Klei, I. J. (2014). A critical
reflection on the principles of peroxisome formation in
yeast. Frontiers in Physiology,
5, Article 110. https://doi.org/10.3389/fphys.2014.00110
Kawalek,
A., & van der Klei, I. (2014). At neutral pH
the chronological lifespan of Hansenula polymorpha increases upon
enhancing the carbon source concentration.
Microbial Cell, 1(6), 189-202. https://doi.org/10.15698/mic2014.06.149
Veenhuis,
M., & van der Klei, I. J. (2014). De novo
peroxisome biogenesis revisited. Microbial
Cell, 1(4), 128-130. https://doi.org/10.15698/mic2014.04.138
Hettema,
E. H., Erdmann, R., van der Klei, I., & Veenhuis,
M. (2014). Evolving models for peroxisome biogenesis.
Current Opinion in Cell Biology,
29C, 25-30. https://doi.org/10.1016/j.ceb.2014.02.002
Scheckhuber,
C. Q., & van der Klei, I. J. (2014). Improved penicillin production. (Patent No.
WO2014003555). https://worldwide.espacenet.com/publicationDetails/originalDocument?CC=WO&NR=2014003555A1&KC=A1&FT=D&ND=3&date=20140103&DB=&locale=en_EP
van
Zutphen, T., Todde, V., de Boer, R., Kreim, M.,
Hofbauer, H. F., Wolinski, H., Veenhuis, M., Klei, I. J. V.
D., & Kohlwein, S. D. (2014). Lipid droplet
autophagy in the yeast Saccharomyces cerevisiae.
Molecular Biology of the Cell,
25(2), 290-301. https://doi.org/10.1091/mbc.E13-08-0448
Kumar,
S., Kawalek, A., & van der Klei, I. J. (2014).
Peroxisomal quality control mechanisms.
Current Opinion in Microbiology, 22,
30-37. https://doi.org/10.1016/j.mib.2014.09.009
van
der Klei, I. J. (2014). Peroxisomes. In L. M.
McManus, & R. N. Mitchell (Eds.), Pathobiology of Human
Disease: A Dynamic Encyclopedia of Disease Mechanisms (pp.
108-113). Elsevier. https://doi.org/10.1016/B978-0-12-386456-7.01407-6
Knoops,
K., Manivannan, S., Cepinska, M. N., Krikken, A.
M., Kram, A. M., Veenhuis, M., & van
der Klei, I. J. (2014). Preperoxisomal vesicles can
form in the absence of Pex3. The Journal of Cell
Biology, 204(5), 659-668. https://doi.org/10.1083/jcb.201310148
Williams,
C., & van der Klei, I. (2014). The Functions
of Pex11 Family Proteins in Peroxisome Biology: Molecular Machines
Involved in Peroxisome Biogenesis and Maintenance. In C.
Brocard, & A. Hartig (Eds.), Molecular Machines Involved in
Peroxisome Biogenesis and Maintenance (pp. 425-437). Springer.
https://doi.org/10.1007/978-3-7091-1788-0_19
Saraya,
R., Gidijala, L., Veenhuis, M., & van der Klei, I.
J. (2014). Tools for genetic engineering of the yeast
Hansenula polymorpha. In V. Mapelli (Ed.), Yeast
Metabolic Engineering: Methods and Protocols (Vol. 1152, pp.
43-62). (Methods in Molecular Biology ; Vol. 1152). Springer
Verlag. https://doi.org/10.1007/978-1-4939-0563-8_3
Pfanner,
N., van der Laan, M., Amati, P., Capaldi, R. A., Caudy, A. A.,
Chacinska, A., Darshi, M., Deckers, M., Hoppins, S., Icho, T.,
Jakobs, S., Ji, J., Kozjak-Pavlovic, V., Meisinger, C., Odgren, P.
R., Park, S. K., Rehling, P., Reichert, A. S., Sheikh, M. S., ...
Nunnari, J. (2014). Uniform nomenclature for the
mitochondrial contact site and cristae organizing system.
The Journal of Cell Biology, 204(7),
1083-1086. https://doi.org/10.1083/jcb.201401006
2013
Scheckhuber,
C. Q., Veenhuis, M., & van der Klei, I. J. (2013).
Improving penicillin biosynthesis in Penicillium chrysogenum
by glyoxalase overproduction. Metabolic
Engineering, 18, 36-43. https://doi.org/10.1016/j.ymben.2013.04.003
Kohlwein,
S. D., Veenhuis, M., & van der Klei, I. J. (2013).
Lipid Droplets and Peroxisomes: Key Players in Cellular Lipid
Homeostasis or A Matter of Fat-Store 'em Up or Burn 'em
Down. Genetics, 193(1), 1-50.
https://doi.org/10.1534/genetics.112.143362
Manivannan,
S., de Boer, R., Veenhuis, M., & van der
Klei, I. J. (2013). Lumenal peroxisomal protein
aggregates are removed by concerted fission and autophagy
events. Autophagy, 9(7),
1044-1056. https://doi.org/10.4161/auto.24543
Kawalek,
A., Lefevre, S. D., Veenhuis, M., & van der Klei, I.
J. (2013). Peroxisomal catalase deficiency modulates
yeast lifespan depending on growth conditions.
Aging-Us, 5(1), 67-83. https://doi.org/10.18632/aging.100519
Williams,
C., & van der Klei, I. J. (2013).
Pexophagy-linked degradation of the peroxisomal membrane
protein Pex3p involves the ubiquitin-proteasome system.
Biochemical and Biophysical Research
Communications, 438(2), 395-401. https://doi.org/10.1016/j.bbrc.2013.07.086
Lefevre,
S. D., van Roermund, C. W., Wanders, R. J. A., Veenhuis, M.,
& van der Klei, I. J. (2013). The significance of
peroxisome function in chronological aging of Saccharomyces
cerevisiae. Aging Cell,
12(5), 784-793. https://doi.org/10.1111/acel.12113
Klei,
I. J. V. D., & Veenhuis, M. (2013). The
Versatility of Peroxisome Function in Filamentous Fungi. In
L. A. D. Río (Ed.), Peroxisomes and their Key Role in
Cellular Signaling and Metabolism (69 ed., pp. 135-152).
(Subcellular Biochemistry; No. 69). Springer.
2012
Opalinski,
L., Bartoszewska, M., Fekken, S., Liu, H., de Boer,
R., van der Klei, I., Veenhuis, M., &
Kiel, J. A. K. W. (2012). De Novo Peroxisome
Biogenesis in Penicillium Chrysogenum Is Not Dependent on the Pex11
Family Members or Pex16. PLoS ONE,
7(4), Article e35490. https://doi.org/10.1371/journal.pone.0035490
Kumar,
S., Lefevre, S. D., Veenhuis, M., & van der Klei, I.
J. (2012). Extension of Yeast Chronological Lifespan
by Methylamine. PLoS ONE,
7(11), Article e48982. https://doi.org/10.1371/journal.pone.0048982
et
al., Carra, S., Kampinga, H. H., Kiel, J. A. K.
W., & van der Klei, I. J. (2012).
Guidelines for the use and interpretation of assays for
monitoring autophagy. Autophagy,
8(4), 445-544. https://doi.org/10.4161/auto.19496
Veiga,
T., Gombert, A. K., Landes, N., Verhoeven, M. D., Kiel, J. A.
K. W., Krikken, A. M., Nijland, J.
G., Touw, H., Luttik, M. A. H., van der Toorn, J. C.,
Driessen, A. J. M., Bovenberg, R. A. L., van
den Berg, M. A., van der Klei, I. J., Pronk, J. T.,
& Daran, J.-M. (2012). Metabolic engineering of
beta-oxidation in Penicillium chrysogenum for improved
semi-synthetic cephalosporin biosynthesis.
Metabolic Engineering, 14(4),
437-448. https://doi.org/10.1016/j.ymben.2012.02.004
Zerbes,
R. M., van der Klei, I. J., Veenhuis, M., Pfanner, N.,
van der Laan, M., & Bohnert, M. (2012). Mitofilin
complexes: conserved organizers of mitochondrial membrane
architecture. Biological Chemistry,
393(11), 1247-1261. https://doi.org/10.1515/hsz-2012-0239
Saraya,
R., Krikken, A. M., Kiel, J. A. K. W.,
Baerends, R. J. S., Veenhuis, M., & van der Klei, I.
J. (2012). Novel genetic tools for Hansenula
polymorpha. Fems Yeast Research,
12(3), 271-278. https://doi.org/10.1111/j.1567-1364.2011.00772.x
Bartoszewska,
M., Williams, C., Kikhney, A., Opalinski, L., van Roermund, C. W.
T., de Boer, R., Veenhuis, M., & van der
Klei, I. J. (2012). Peroxisomal Proteostasis Involves
a Lon Family Protein That Functions as Protease and
Chaperone. The Journal of Biological
Chemistry, 287(33), 27380-27395. https://doi.org/10.1074/jbc.M112.381566
Otzen,
M., Rucktaeschel, R., Thoms, S., Ernmrich, K.,
Krikken, A. M., Erdmann, R., van der Klei, I.
J., Emmrich, K., & Krikken, A. M. (2012). Pex19p
Contributes to Peroxisome Inheritance in the Association of
Peroxisomes to Myo2p. Traffic,
13(7), 947-959. https://doi.org/10.1111/j.1600-0854.2012.01364.x
Zerbes,
R. M., Bohnert, M., Stroud, D. A., von der Malsburg, K.,
Kram, A., Oeljeklaus, S., Warscheid, B., Becker, T.,
Wiedemann, N., Veenhuis, M., van der Klei, I. J.,
Pfanner, N., & van der Laan, M. (2012). Role of MINOS in
Mitochondrial Membrane Architecture: Cristae Morphology and Outer
Membrane Interactions Differentially Depend on Mitofilin
Domains. Journal of Molecular Biology,
422(2), 183-191. https://doi.org/10.1016/j.jmb.2012.05.004
Bohnert,
M., Wenz, L.-S., Zerbes, R. M., Horvath, S. E., Stroud, D. A., von
der Malsburg, K., Mueller, J. M., Oeljeklaus, S., Perschil, I.,
Warscheid, B., Chacinska, A., Veenhuis, M., van der Klei, I.
J., Daum, G., Wiedemann, N., Becker, T., Pfanner, N., &
van der Laan, M. (2012). Role of mitochondrial inner membrane
organizing system in protein biogenesis of the mitochondrial outer
membrane. Molecular Biology of the
Cell, 23(20), 3948-3956. https://doi.org/10.1091/mbc.E12-04-0295
Manivannan,
S., Scheckhuber, C. Q., Veenhuis, M., & van der Klei, I.
J. (2012). The impact of peroxisomes on cellular aging
and death. Frontiers in Oncology,
2(7), 1-7. Article 50. https://doi.org/10.3389/fonc.2012.00050
Zerbes,
R. M., Bohnert, M., Malsburg, K. V. D., Warscheid, B., Klei,
I. J. V. D., Pfanner, N., & Laan, M. V. D. (2012).
The MINOS complex: Keeper of mitochondrial membrane
architecture. Biochimica et Biophysica
Acta, 1817(33), S74-S75. https://doi.org/10.1016/j.bbabio.2012.06.208
Williams,
C., Aksam, E. B., Gunkel, K., Veenhuis, M., & van der
Klei, I. J. (2012). The relevance of the non-canonical
PTS1 of peroxisomal catalase. Biochimica et
Biophysica Acta-Molecular Cell Research,
1823(7), 1133-1141. https://doi.org/10.1016/j.bbamcr.2012.04.006
2011
Bartosweska,
M., Kiel, J. A. K. W., Bovenberg, R. A.
L., Veenhuis, M., & van der Klei, I. J.
(2011). Autophagy Deficiency Promotes β-Lactam
Production in Penicillium chrysogenum. Applied and
environmental microbiology, 77(4), 1413-1422.
https://doi.org/10.1128/aem.01531-10
Boender,
L. G. M., van Maris, A. J. A., de Hulster, E. A. F., Almering, M.
J. H., van der Klei, I. J., Veenhuis, M., de Winde, J.
H., Pronk, J. T., & Daran-Lapujade, P. (2011). Cellular
responses of Saccharomyces cerevisiae at near-zero growth rates:
transcriptome analysis of anaerobic retentostat cultures.
Fems Yeast Research, 11(8), 603-620.
https://doi.org/10.1111/j.1567-1364.2011.00750.x
Van
Der Klei, I., Veenhuis, M., Brul, S., Klis, F. M., De Groot,
P. W. J., Müller, W. H., van Driel, K. G. A., & Boekhout,
T. (2011). Cytology, cell walls and septa: A summary of yeast
cell biology from a phylogenetic perspective. In C. P.
Kurtzman, J. W. Fell, & T. Boekhout (Eds.), The Yeasts
(5 ed., Vol. 1, pp. 111-128). Elsevier. https://doi.org/10.1016/B978-0-444-52149-1.00008-2
van
Zutphen, T., Veenhuis, M., & van der Klei, I.
J. (2011). Damaged peroxisomes are subject to rapid
autophagic degradation in the yeast Hansenula polymorpha.
Autophagy, 7(8), 863-872. https://doi.org/10.4161/auto.7.8.15697
von
der Malsburg, K., Mueller, J. M., Bohnert, M., Oeljeklaus, S.,
Kwiatkowska, P., Becker, T., Loniewska-Lwowska, A., Wiese, S., Rao,
S., Milenkovic, D., Hutu, D. P., Zerbes, R. M., Schulze-Specking,
A., Meyer, H. E., Martinou, J.-C., Rospert, S., Rehling, P.,
Meisinger, C., Veenhuis, M., ... Müller, J. M. (2011).
Dual Role of Mitofilin in Mitochondrial Membrane Organization
and Protein Biogenesis. Developmental
Cell, 21(4), 694-707. https://doi.org/10.1016/j.devcel.2011.08.026
van
der Klei, I., Veenhuis, M., & Klompmaker, S. (2011).
Improved methods and host cells for the
production and use of D-amino acid oxidase (DAO). (Patent
No. 10158443.1-2403).
van
der Klei, I. J. (2011). Live by fusion, avoid fission:
Comment on: Scheckhuber CQ, et al. Cell Cycle 2011;
10:3105–10. Cell Cycle,
10(22), 3826. https://doi.org/10.4161/cc.10.22.18234
Opalinski,
L., Kiel, J. A. K. W., Williams, C., Veenhuis,
M., & van der Klei, I. J. (2011). Membrane
curvature during peroxisome fission requires Pex11.
EMBO Journal, 30(1), 5-16. https://doi.org/10.1038/emboj.2010.299
Krygowska,
M., Veenhuis, M., Klei, I. J. V. D., & Nagotu, S.
(2011). Peroxisome Fission is Associated with Reorganization
of Specific Membrane Proteins.
Traffic, 12(7), 925-937. https://doi.org/10.1111/j.1600-0854.2011.01198.x
Opalinski,
L., Veenhuis, M., & van der Klei, I. J. (2011).
Peroxisomes: Membrane events accompanying peroxisome
proliferation. International journal of
biochemistry & cell biology, 43(6),
847-851. https://doi.org/10.1016/j.biocel.2011.03.006
van
Zutphen, T., & van der Klei, I. J. (2011).
Quantitative analysis of organelle abundance, morphology and
dynamics. Current Opinion in
Biotechnology, 22(1), 127-132. https://doi.org/10.1016/j.copbio.2010.10.015
Bartoszewska,
M., Opalinski, L., Veenhuis, M., & van der Klei, I.
J. (2011). The significance of peroxisomes in
secondary metabolite biosynthesis in filamentous fungi.
Biotechnology Letters, 33(10),
1921-1931. https://doi.org/10.1007/s10529-011-0664-y
2010
Saraya,
R., Cepinska, M. N., Kiel, J. A. K. W., Veenhuis,
M., van der Klei, I. J., & Cepińska, M. N.
(2010). A conserved function for Inp2 in peroxisome
inheritance. Biochimica et Biophysica
Acta-Molecular Cell Research, 1803(5), 617 -
622. https://doi.org/10.1016/j.bbamcr.2010.02.001
Klompmaker,
S. H., Kilic, A., Baerends, R. J., Veenhuis, M., & van
der Klei, I. J. (2010). Activation of a peroxisomal
Pichia pastoris d-amino acid oxidase, which uses d-alanine as a
preferred substrate, depends on pyruvate carboxylase.
Fems Yeast Research, 10(6), 708-716.
https://doi.org/10.1111/j.1567-1364.2010.00647.x
van
Zutphen, T., Baerends, R. J. S., Susanna,
K., de Jong, A., Kuipers, O. P.,
Veenhuis, M., & van der Klei, I. J. (2010).
Adaptation of Hansenula polymorpha to methanol: A
transcriptome analysis. BMC Genomics,
11(1). https://doi.org/10.1186/1471-2164-11-1
van
den Berg, M. A., Gidijala, L., Kiel, J. A. K.
W., Bovenberg, R. A. L., & van der
Klei, I. J. (2010). Biosynthesis of active
pharmaceuticals: β-lactam biosynthesis in filamentous
fungi. Biotechnol Genet Eng Rev,
27(1), 1-31.
Nagotu,
S., Veenhuis, M., & van der Klei, I. J. (2010).
Divide et impera: The dictum of peroxisomes.
Traffic, 11(2), 175-184. https://doi.org/10.1111/j.1600-0854.2009.01019.x
Huberts,
D., & van der Klei, I. J. (2010).
Moonlighting proteins: An intriguing mode of
multitasking. Biochimica et Biophysica
Acta-Molecular Cell Research, 1803(4),
520-525. https://doi.org/10.1016/j.bbamcr.2010.01.022
Opalinski,
L., Kiel, J. A. K. W., Homan, T. G., Veenhuis,
M., van der Klei, I. J., & Opaliński, Ł.
(2010). Penicillium chrysogenum Pex14/17p – a novel
component of the peroxisomal membrane that is important for
penicillin production. Febs Journal,
277(15), 3203-3218. https://doi.org/10.1111/j.1742-4658.2010.07726.x
Meijer,
W. H., Gidijala, L., Fekken, S., Kiel, J. A. K. W.,
van den Berg, M. A., Lascaris, R., Bovenberg, R. A.
L., & van der Klei, I. J. (2010).
Peroxisomes are required for efficient penicillin
biosynthesis in Penicillium chrysogenum. Applied
and environmental microbiology, 76(17),
5702-5709. https://doi.org/10.1128/AEM.02327-09
Saraya,
R., Veenhuis, M., & van der Klei, I. J. (2010).
Peroxisomes as dynamic organelles: peroxisome abundance in
yeast. Febs Journal, 277(16),
3279-3288. https://doi.org/10.1111/j.1742-4658.2010.07740.x
van
der Klei, I. J. (2010). Peroxisomes as dynamic
organelles. Febs Journal,
277(16), 3267. https://doi.org/10.1111/j.1742-4658.2010.07738.x
Huberts,
D. H. E. W., Venselaar, H., Vriend, G., Veenhuis, M., &
van der Klei, I. J. (2010). The moonlighting function
of pyruvate carboxylase resides in the non-catalytic end of the TIM
barrel. Biochimica et Biophysica Acta-Molecular
Cell Research, 1803(9), 1038-1042. https://doi.org/10.1016/j.bbamcr.2010.03.018
Koetsier,
M. J., Gombert, A. K., Fekken, S., Bovenberg, R. A.
L., Van den Berg, M. A., Kiel, J. A. K. W.,
Jekel, P. A., Janssen, D. B., Pronk, J. T., Van
der Klei, I. J., & Daran, J.-M. (2010). The
Penicillium chrysogenum aclA gene encodes a
broad-substrate-specificity acyl-coenzyme A ligase involved in
activation of adipic acid, a side-chain precursor for cephem
antibiotics. Fungal Genetics and
Biology, 47(1), 33-42. https://doi.org/10.1016/j.fgb.2009.10.003
2009
Gidijala,
L., Kiel, J. A. K. W., Douma, R. D., Seifar, R. M.,
van Gulik, W. M., Bovenberg, R. A. L., Veenhuis,
M., & van der Klei, I. J. (2009). An
Engineered Yeast Efficiently Secreting Penicillin.
PLoS ONE, 4(12), Article 8317. https://doi.org/10.1371/journal.pone.0008317
Todde,
V., Veenhuis, M., & van der Klei, I. J. (2009).
Autophagy: Principles and significance in health and
disease. Biochimica et biophysica acta-Molecular
basis of disease, 1792(1), 3-13. https://doi.org/10.1016/j.bbadis.2008.10.016
Krikken,
A. M., Veenhuis, M., & van der Klei, I. J.
(2009). Hansenula polymorpha pex11 cells are affected in
peroxisome retention. Febs Journal,
276(5), 1429-1439. https://doi.org/10.1111/j.1742-4658.2009.06883.x
Kiel,
J. A. K. W., van den Berg, M. A., Fusetti, F.,
Poolman, B., Bovenberg, R. A. L., Veenhuis,
M., & van der Klei, I. J. (2009). Matching
the proteome to the genome: the microbody of penicillin-producing
Penicillium chrysogenum cells. FUNCTIONAL &
INTEGRATIVE GENOMICS, 9(2), 167-184. https://doi.org/10.1007/s10142-009-0110-6
Kurbatova,
E., Otzen, M., & van der Klei, I. J.
(2009). p24 proteins play a role in peroxisome proliferation
in yeast. FEBS Letters,
583(19), 3175-3180. https://doi.org/10.1016/j.febslet.2009.08.040
Sagt,
C. M. J., Haaft, P. J. T., Minneboo, I. M., Hartog, M. P., Damveld,
R. A., Laan, J. M. V. D., Akeroyd, M., Wenzel, T. J.,
Luesken, F. A., Veenhuis, M., Klei, I. V. D., &
Winde, J. H. D. (2009). Peroxicretion: a novel secretion
pathway in the eukaryotic cell. BMC
Biotechnology, 9(1), Article 48. https://doi.org/10.1186/1472-6750-9-48
Aksam,
E. B., de Vries, B., van der Klei, I.
J., & Kiel, J. A. K. W. (2009).
Preserving organelle vitality: peroxisomal quality control
mechanisms in yeast. Fems Yeast
Research, 9(6), 808-820. https://doi.org/10.1111/j.1567-1364.2009.00534.x
Kiel,
J. A. K. W., & van der Klei, I. J. (2009).
Proteins involved in microbody biogenesis and degradation in
Aspergillus nidulans. Fungal Genetics and
Biology, 46(1), S62-S71. https://doi.org/10.1016/j.fgb.2008.07.009
Last modified: | 09 June 2023 8.36 p.m. |