M.A.A. (Muhamed Amin) Amin, PhD

University College Groningen

Telephone:

+31 6 1058 0070

E-mail:

m.a.a.amin rug.nl

ORCID Research Portal

Publications

Mapping the Oxygens in the Oxygen-Evolving Complex of Photosystem II by Their Nucleophilicity Using Quantum Descriptors

Amin, M., Kaur, D., Brudvig, G. W. & Brooks, B. R., 2-Feb-2024, (E-pub ahead of print) In: Journal of Chemical Theory and Computation. 20, 3, p. 1414–1422 9 p.

Research output: Contribution to journal › Article › Academic › peer-review

Bridging the Coordination Chemistry of Small Compounds and Metalloproteins Using Machine Learning

Kapuścińska, K., Dukała, Z., Doha, M., Ansari, E., Wang, J., Brudvig, G. W., Brooks, B. & Amin, M., 6-Dec-2023, (E-pub ahead of print) In: Journal of chemical information and modeling.

Research output: Contribution to journal › Article › Academic › peer-review

Computing the Relative Affinity of Chlorophylls a and b to Light-Harvesting Complex II

Ranepura, G. A., Mao, J., Vermaas, J. V., Wang, J., Gisriel, C. J., Wei, R. J., Ortiz-Soto, J., Uddin, M. R., Amin, M., Brudvig, G. W. & Gunner, M. R., 28-Dec-2023, In: Journal of Physical Chemistry B. 127, 51, p. 10974-10986 13 p.

Research output: Contribution to journal › Article › Academic › peer-review

Engineering of Molybdenum Sulfide Nanobunches on MWCNTs: Modulation of Active Sites and Electronic Conductivity via Controllable Solvothermal Deposition

Ali, A., Basuni, M., Shams-Eldin, R., Pilz, L., Hashem, T., Heinle, M., Nefedov, A., Amin, M., Tsotsalas, M., Drazic, G., Hassanien, A. & Alkordi, M. H., 10-Mar-2023, In: ACS Applied Nano Materials. 6, 5, p. 3627–3636 10 p.

Research output: Contribution to journal › Article › Academic › peer-review

Ionizing radiation induces cross-linking of two noncovalently-bound collagen mimetic peptide triple helices in the absence of molecular environment

Abdelmouleh, M., Amin, M., Lalande, M., Schlathölter, T. & Poully, J-C., 7-Nov-2023, In: PPCP : Physical Chemistry Chemical Physics. 25, 42, p. 29249-29256 8 p.

Research output: Contribution to journal › Article › Academic › peer-review

Predicting the oxidation states of Mn ions in the oxygen-evolving complex of photosystem II using supervised and unsupervised machine learning

Amin, M., Apr-2023, In: Photosynthesis Research. 156, p. 89–100 12 p.

Research output: Contribution to journal › Article › Academic › peer-review

Structure of a dimeric photosystem II complex from a cyanobacterium acclimated to far-red light

Gisriel, C. J., Shen, G., Flesher, D. A., Kurashov, V., Golbeck, J. H., Brudvig, G. W., Amin, M. & Bryant, D. A., Jan-2023, In: Journal of Biological Chemistry. 299, 1, 12 p., 102815.

Research output: Contribution to journal › Article › Academic › peer-review

CMInject: Python framework for the numerical simulation of nanoparticle injection pipelines

Welker, S., Amin, M. & Küpper, J., Jan-2022, In: Computer Physics Communications. 270, 8 p., 108138.

Research output: Contribution to journal › Article › Academic › peer-review

Computational Approach for Probing Redox Potential for Iron-Sulfur Clusters in Photosystem I

Ali, F., Shafaa, M. W. & Amin, M., 24-Feb-2022, In: Biology. 11, 3, 14 p., 362.

Research output: Contribution to journal › Article › Academic › peer-review

Cryo-EM structure of a tetrameric photosystem I from Chroococcidiopsis TS-821, a thermophilic, unicellular, non-heterocyst-forming cyanobacterium

Semchonok, D. A., Mondal, J., Cooper, C. J., Schlum, K., Li, M., Amin, M., Sorzano, C. O. S., Ramírez-Aportela, E., Kastritis, P. L., Boekema, E. J., Guskov, A. & Bruce, B. D., 10-Jan-2022, In: Plant Communications. 3, 1, 18 p., 100248.

Research output: Contribution to journal › Article › Academic › peer-review