University of Groningenfounded in 1614  -  top 100 university
Close
How to find us prof. dr. J.M. (Jan Maarten) van Dijl

prof. dr. J.M. (Jan Maarten) van Dijl

Professor of Medical Microbiology

No picture available
E-mail:
j.m.van.dijl01 umcg.nl

Research

Research units:

Advanced
Advanced

Reset

to
1 - 50 out of 280Page size: 50
  1. 2021
  2. Prajapati, B., Bernal-Cabas, M., Lopez-Alvarez, M., Schaffer, M., Bartel, J., Rath, H., Steil, L., Becher, D., Volker, U., Mader, U., & van Dijl, J. M. (2021). Double trouble: Bacillus depends on a functional Tat machinery to avoid severe oxidative stress and starvation upon entry into a NaCl-depleted environment. Biochimica et Biophysica Acta (BBA) - Molecular Cell Research, 1868(2). https://doi.org/10.1016/j.bbamcr.2020.118914
  3. Park, H. Y., Zoller, S. D., Hegde, V., Sheppard, W., Burke, Z., Blumstein, G., Hamad, C., Sprague, M., Hoang, J., Smith, R., Alves Fernandes Bispo, M., Czupryna, J., Miller, L. S., Lopez Alvarez, M., Alves Fernandes Bispo, M., Oosten, van, M., Dijl, van, J. M., Francis, K. P., & Bernthal, N. M. (2021). Comparison of two fluorescent probes in preclinical non-invasive imaging and image-guided debridement surgery of Staphylococcal biofilm implant infections. Scientific Reports, 11, [1622]. https://doi.org/10.1038/s41598-020-78362-7
  4. 2020
  5. Zhao, X., Chlebowicz-Flissikowska, M. A., Wang, M., Vera Murguia, E., de Jong, A., Becher, D., Maaß, S., Buist, G., & van Dijl, J. M. (2020). Exoproteomic profiling uncovers critical determinants for virulence of livestock-associated and human-originated Staphylococcus aureus ST398 strains. Virulence, 11(1), 947-963. https://doi.org/10.1080/21505594.2020.1793525
  6. Alves Fernandes Bispo, M., Anaya Sánchez, A., Suhani, S., Raineri, E., Lopez Alvarez, M., Heuker, M., Szymanski, W., Romero Pastrana, F., Buist, G., Horswill, A. R., Francis, K. P., Dam, van, G., Oosten, van, M., & Dijl, van, J. M. (2020). Fighting Staphylococcus aureus infections with light and photoimmunoconjugates. JCI Insight, (22), 1-16. https://doi.org/10.1172/jci. insight.139512.
  7. López-Álvarez, M., Heuker, M., Schoenmakers, J. W. A., van Dam, G. M., McNamara, J. O., van Dijl, J. M., & van Oosten, M. (2020). The smart activatable P2&3TT probe allows accurate, fast, and highly sensitive detection of Staphylococcus aureus in clinical blood culture samples. Scientific Reports, 10(1), 19216. https://doi.org/10.1038/s41598-020-76254-4
  8. Schoenmakers, J. W. A., Heuker, M., Lopez-Alvarez, M., Nagengast, W. B., van Dam, G. M., van Dijl, J. M., Jutte, P. C., & van Oosten, M. (2020). Image-guided in situ detection of bacterial biofilms in a human prosthetic knee infection model: a feasibility study for clinical diagnosis of prosthetic joint infections. European Journal of Nuclear Medicine and Molecular Imaging. https://doi.org/10.1007/s00259-020-04982-w
  9. Szymanski, W., Reessing, F., Alves Fernandes Bispo, M., Lopez Alvarez, M., Oosten, van, M., Feringa, B. L., & Dijl, van, J. M. (2020). A Facile and Reproducible Synthesis of Near-Infrared Fluorescent Conjugates with Small Targeting Molecules for Microbial Infection Imaging. ACS Omega, (35), 22071-22080. https://doi.org/10.2021/acsomega.0c02094
  10. Medina, L. M. P., Becker, A-K., Michalik, S., Surmann, K., Hildebrandt, P., Salazar, M. G., Mekonnen, S. A., Kaderali, L., Voelker, U., & van Dijl, J. M. (2020). Interaction of Staphylococcus aureus and Host Cells upon Infection of Bronchial Epithelium during Different Stages of Regeneration. ACS Infectious Diseases, 6(8), 2279-2290. https://doi.org/10.1021/acsinfecdis.0c00403
  11. Dreisbach, A., Wang, M., van der Kooi-Pol, M. M., Reilman, E., Koedijk, D. G. A. M., Mars, R. A. T., Duipmans, J., Jonkman, M., Benschop, J. J., Bonarius, H. P. J., Groen, H., Hecker, M., Otto, A., Baesell, K., Bernhardt, J., Back, J. W., Becher, D., Buist, G., & van Dijl, J. M. (2020). Tryptic Shaving of Staphylococcus aureus Unveils Immunodominant Epitopes on the Bacterial Cell Surface. Journal of Proteome Research, 19(8), 2997-3010. https://doi.org/10.1021/acs.jproteome.0c00043
  12. Bernal-Cabas, M., Miethke, M., Antelo-Varela, M., Aguilar Suárez, R., Neef, J., Schön, L., Gabarrini, G., Otto, A., Becher, D., Wolf, D., & van Dijl, J. M. (2020). Functional association of the stress-responsive LiaH protein and the minimal TatAyCy protein translocase in Bacillus subtilis. Biochimica et Biophysica Acta - Molecular Cell Research, 1867(8), [118719]. https://doi.org/10.1016/j.bbamcr.2020.118719
  13. Sheppard, W. L., Mosich, G. M., Smith, R. A., Hamad, C. D., Park, H. Y., Zoller, S. D., Trikha, R., McCoy, T. K., Borthwell, R., Hoang, J., Truong, N., Cevallos, N., Clarkson, S., Hori, K. R., van Dijl, J. M., Francis, K. P., Petrigliano, F. A., & Bernthal, N. M. (2020). Novel in vivo mouse model of shoulder implant infection. Journal of Shoulder and Elbow Surgery, 29(7), 1412-1424. https://doi.org/10.1016/j.jse.2019.10.032
  14. Heuker, M., Koser, U., Ott, A., Karrenbeld, A., van Dijl, J. M., van Dam, G. M., de Smet, A. M. G. A., & van Oosten, M. (2020). Yeast Infections after Esophagectomy: A Retrospective Analysis. Scientific Reports, 10(1), [4343]. https://doi.org/10.1038/s41598-020-61113-z
  15. Gabarrini, G., Grasso, S., van Winkelhoff, A. J., & van Dijl, J. M. (2020). Gingimaps: Protein Localization in the Oral Pathogen Porphyromonas gingivalis. Microbiology and Molecular Biology Reviews, 84(1), [e00032-19]. https://doi.org/10.1128/MMBR.00032-19
  16. Antelo-Varela, M., Aguilar Suárez, R., Bartel, J., Bernal-Cabas, M., Stobernack, T., Sura, T., van Dijl, J. M., Maaß, S., & Becher, D. (2020). Membrane Modulation of Super-Secreting “midiBacillus” Expressing the Major Staphylococcus aureus Antigen – A Mass-Spectrometry-Based Absolute Quantification Approach. Frontiers in Bioengineering and Biotechnology, 8, [143]. https://doi.org/10.3389/fbioe.2020.00143
  17. Neef, J., Bongiorni, C., Schmidt, B., Goosens, V. J., & van Dijl, J. M. (2020). Relative contributions of non-essential Sec pathway components and cell envelope-associated proteases to high-level enzyme secretion by Bacillus subtilis. Microbial Cell Factories, 19(1), [52]. https://doi.org/10.1186/s12934-020-01315-2
  18. 2019
  19. da Cruz Campos, A. C., Cavallo, F. M., L Andrade, N., van Dijl, J. M., Couto, N., Zrimec, J., Lo Ten Foe, J. R., P Rosa, A. C., V Damasco, P., Friedrich, A. W., Chlebowicz-Flissikowska, M. A., & Rossen, J. W. A. (2019). Determining the Virulence Properties of Escherichia coli ST131 Containing Bacteriocin-Encoding Plasmids Using Short- and Long-Read Sequencing and Comparing Them with Those of Other E. coli Lineages. Microorganisms, 7(11), [534]. https://doi.org/10.3390/microorganisms7110534
  20. Antelo-Varela, M., Bartel, J., Quesada-Ganuza, A., Appel, K., Bernal-Cabas, M., Sura, T., Otto, A., Rasmussen, M., van Dijl, J. M., Nielsen, A., Maass, S., & Becher, D. (2019). Ariadne's Thread in the Analytical Labyrinth of Membrane Proteins: Integration of Targeted and Shotgun Proteomics for Global Absolute Quantification of Membrane Proteins. Analytical Chemistry, 91(18), 11972-11980. https://doi.org/10.1021/acs.analchem.9b02869
  21. Frain, K. M., Robinson, C., & van Dijl, J. M. (2019). Transport of Folded Proteins by the Tat System. Protein journal, 38(4), 377-388. https://doi.org/10.1007/s10930-019-09859-y
  22. Heuker, M., Sijbesma, J. W. A., Aguilar Suárez, R., de Jong, J. R., Boersma, H. H., Luurtsema, G., Elsinga, P. H., Glaudemans, A. W. J. M., van Dam, G. M., van Dijl, J. M., Slart, R. H. J. A., & van Oosten, M. (2019). Publisher Correction: In vitro imaging of bacteria using 18F-fluorodeoxyglucose micro positron emission tomography. Scientific Reports, 9(1), [10535]. https://doi.org/10.1038/s41598-019-46786-5
  23. Zhao, X., Palma, L., Stobernack, T., Glasner, C., de Jong, A., Utari, P., Setroikromo, R., Quax, W. J., Otto, A., Becher, D., Buist, G., & van Dijl, J. M. (2019). Exoproteome Heterogeneity among Closely Related Staphylococcus aureus t437 Isolates and Possible Implications for Virulence. Journal of Proteome Research, 18(7), 2859-2874. https://doi.org/10.1021/acs.jproteome.9b00179
  24. Palma Medina, L. M., Becker, A-K., Michalik, S., Yedavally, H., Raineri, E. J. M., Hildebrandt, P., Gesell Salazar, M., Surmann, K., Pförtner, H., Mekonnen, S. A., Salvati, A., Kaderali, L., van Dijl, J. M., & Völker, U. (2019). Metabolic cross-talk between human bronchial epithelial cells and internalized Staphylococcus aureus as a driver for infection. Molecular & Cellular Proteomics, 18(5), 892-908. https://doi.org/10.1074/mcp.RA118.001138
  25. Denham, E. L., Piersma, S., Rinket, M., Reilman, E., de Goffau, M. C., & van Dijl, J. M. (2019). Differential expression of a prophage-encoded glycocin and its immunity protein suggests a mutualistic strategy of a phage and its host. Scientific Reports, 9(1), 2845. [2845]. https://doi.org/10.1038/s41598-019-39169-3
  26. Mekonnen, S. A., Palma Medina, L. M., Michalik, S., Loreti, M. G., Gesell Salazar, M., van Dijl, J. M., & Völker, U. (2019). Metabolic niche adaptation of community- and hospital-associated methicillin-resistant Staphylococcus aureus. Journal of proteomics, 193, 154-161. https://doi.org/10.1016/j.jprot.2018.10.005
  27. Zoller, S. D., Park, H. Y., Olafsen, T., Zamilpa, C., Burke, Z. D., Blumstein, G., Sheppard, W. L., Hamad, C. D., Hori, K. R., Tseng, J-C., Czupryna, J., McMannus, C., Lee, J. T., Bispo, M., Romero Pastrana, F., Raineri, E. J., Miller, J. F., Miller, L. S., van Dijl, J. M., ... Bernthal, N. M. (2019). Multimodal imaging guides surgical management in a preclinical spinal implant infection model. JCI Insight, 4(3), [124813]. https://doi.org/10.1172/jci.insight.124813
  28. Seinen, J., Dieperink, W., Mekonnen, S. A., Lisotto, P., Harmsen, H. J. M., Hiemstra, B., Ott, A., Schultz, D., Lalk, M., Oswald, S., Hammerschmidt, S., de Smet, A. M. G. A., & van Dijl, J. M. (2019). Heterogeneous antimicrobial activity in broncho-alveolar aspirates from mechanically ventilated intensive care unit patients. Virulence, 10(1), 879-891. https://doi.org/10.1080/21505594.2019.1682797
  29. Espina, M. D. T., Gabarrini, G., Harmsen, H. J. M., Westra, J., van Winkelhoff, A. J., & van Dijl, J. M. (2019). Talk to your gut: The oral-gut microbiome axis and its immunomodulatory role in the etiology of rheumatoid arthritis. FEMS Microbiology Reviews, 43(1), 1-18. https://doi.org/10.1093/femsre/fuy035
  30. Aguilar Suarez, R., Stülke, J., & van Dijl, J. (2019). Less is more: towards a genome-reduced Bacillus cell factory for ‘difficult proteins’. ACS Synthetic Biology, 8(1), 99-108. https://doi.org/10.1021/acssynbio.8b00342
  31. 2018
  32. Bonn, F., Maaß, S., & van Dijl, J. M. (2018). Enrichment of Cell Surface-Associated Proteins in Gram-Positive Bacteria by Biotinylation or Trypsin Shaving for Mass Spectrometry Analysis. In D. Becher (Ed.), Microbial Proteomics (Vol. 1841, pp. 35-43). (Methods in Molecular Biology). Humana Press. https://doi.org/10.1007/978-1-4939-8695-8_4
  33. Gabarrini, G., Heida, R., van Ieperen, N., Curtis, M. A., van Winkelhoff, A. J., & van Dijl, J. M. (2018). Dropping anchor: Attachment of peptidylarginine deiminase via A-LPS to secreted outer membrane vesicles of Porphyromonas gingivalis. Scientific Reports, 8(1), [8949]. https://doi.org/10.1038/s41598-018-27223-5
  34. Gabarrini, G., Palma Medina, L. M., Stobernack, T., Prins, R. C., du Teil Espina, M., Kuipers, J., Chlebowicz, M. A., Rossen, J. W. A., van Winkelhoff, A. J., & van Dijl, J. M. (2018). There's no place like OM: Vesicular sorting and secretion of the peptidylarginine deiminase of Porphyromonas gingivalis. Virulence, 9(1), 456-464. https://doi.org/10.1080/21505594.2017.1421827
  35. Gabarrini, G., Chlebowicz, M. A., Vega Quiroz, M. E., Veloo, A. C. M., Rossen, J. W. A., Harmsen, H. J. M., Laine, M. L., van Dijl, J. M., & van Winkelhoff, A. J. (2018). Conserved Citrullinating Exoenzymes in Porphyromonas Species. Journal of Dental Research, 97(5), 556-562. https://doi.org/10.1177/0022034517747575
  36. Desmet, S., Nepal, S., van Dijl, J. M., Van Ranst, M., Chlebowicz, M. A., Rossen, J. W., Van Houdt, J. K. J., Maes, P., Lagrou, K., & Bathoorn, E. (2018). Antibiotic resistance plasmids cointegrated into a megaplasmid harbouring the blaOXA-427 carbapenemase gene. Antimicrobial Agents and Chemotherapy, 62(3), [e01448-17]. https://doi.org/10.1128/AAC.01448-17
  37. Romero Pastrana, F., Neef, J., Koedijk, D. G. A. M., De Graaf, D., Duipmans, J., Jonkman, M. F., Engelmann, S., Van Dijl, J. M., & Buist, G. (2018). Human antibody responses against non-covalently cell wall-bound Staphylococcus aureus proteins. Scientific Reports, 8(1), [3234]. https://doi.org/10.1038/s41598-018-21724-z
  38. Rosman, C. W. K., Romero Pastrana, F., Buist, G., Heuker, M., van Oosten, M., McNamara, J. O., van Dam, G. M., & van Dijl, J. M. (2018). Ex Vivo Tracer Efficacy in Optical Imaging of Staphylococcus Aureus Nuclease Activity. Scientific Reports, 8(1), [1305]. https://doi.org/10.1038/s41598-018-19289-y
  39. Pastrana, F. R., Thompson, J. M., Heuker, M., Hoekstra, H., Dillen, C. A., Ortines, R. V., Ashbaugh, A. G., Pickett, J. E., Linssen, M. D., Bernthal, N. M., Francis, K. P., Buist, G., van Oosten, M., van Dam, G. M., Thorek, D. L. J., Miller, L. S., & van Dijl, J. M. (2018). Noninvasive optical and nuclear imaging of Staphylococcus-specific infection with a human monoclonal antibody-based probe. Virulence, 9(1), 262-272. https://doi.org/10.1080/21505594.2017.1403004
  40. Hoekstra, H., Romero Pastrana, F., Bonarius, H. P. J., van Kessel, K. P. M., Elsinga, G. S., Kooi, N., Groen, H., van Dijl, J. M., & Buist, G. (2018). A human monoclonal antibody that specifically binds and inhibits the staphylococcal complement inhibitor protein SCIN. Virulence, 9(1), 70-82. https://doi.org/10.1080/21505594.2017.1294297
  41. Stobernack, T., du Teil Espina, M., Mulder, L. M., Palma Medina, L. M., Piebenga, D. R., Gabarrini, G., Zhao, X., Janssen, K. M. J., Hulzebos, J., Brouwer, E., Sura, T., Becher, D., van Winkelhoff, A. J., Götz, F., Otto, A., Westra, J., & van Dijl, J. M. (2018). A Secreted Bacterial Peptidylarginine Deiminase Can Neutralize Human Innate Immune Defenses. Mbio, 9(5). https://doi.org/10.1128/mBio.01704-18
  42. Nepal, S., Bonn, F., Grasso, S., Stobernack, T., de Jong, A., Zhou, K., Wedema, R., Rosema, S., Becher, D., Otto, A., Rossen, J. W., van Dijl, J. M., & Bathoorn, E. (2018). An ancient family of mobile genomic islands introducing cephalosporinase and carbapenemase genes in Enterobacteriaceae. Virulence, 9(1), 1377-1389. https://doi.org/10.1080/21505594.2018.1509666
  43. García-Pérez, A. N., de Jong, A., Junker, S., Becher, D., Chlebowicz, M. A., Duipmans, J. C., Jonkman, M. F., & van Dijl, J. M. (2018). From the wound to the bench: exoproteome interplay between wound-colonizing Staphylococcus aureus strains and co-existing bacteria. Virulence, 9(1), 363-378. https://doi.org/10.1080/21505594.2017.1395129
  44. Nagel, A., Michalik, S., Debarbouille, M., Hertlein, T., Salazar, M. G., Rath, H., Msadek, T., Ohlsen, K., van Dijl, J. M., Voelker, U., & Maeder, U. (2018). Inhibition of Rho Activity Increases Expression of SaeRS-Dependent Virulence Factor Genes in Staphylococcus aureus, Showing a Link between Transcription Termination, Antibiotic Action, and Virulence. Mbio, 9(5), [ARTN e01332-18]. https://doi.org/10.1128/mBio.01332-18
  45. 2017
  46. Pastrana, F. R., Neef, J., van Dijl, J. M., & Buist, G. (2017). A Lactococcus lactis expression vector set with multiple affinity tags to facilitate isolation and direct labeling of heterologous secreted proteins. Applied Microbiology and Biotechnology, 101(22), 8139-8149. https://doi.org/10.1007/s00253-017-8524-x
  47. Amissah, N. A., Buultjens, A. H., Ablordey, A., van Dam, L., Opoku-Ware, A., Baines, S. L., Bulach, D., Tetteh, C. S., Prah, I., van der Werf, T. S., Friedrich, A. W., Seemann, T., van Dijl, J. M., Stienstra, Y., Stinear, T. P., & Rossen, J. W. (2017). Methicillin Resistant Staphylococcus aureus Transmission in a Ghanaian Burn Unit: The Importance of Active Surveillance in Resource-Limited Settings. Frontiers in Microbiology, 8, [1906]. https://doi.org/10.3389/fmicb.2017.01906
  48. Glasner, C., de Goffau, M. C., van Timmeren, M. M., Schulze, M. L., Jansen, B., Tavakol, M., van Wamel, W. J. B., Stegeman, C. A., Kallenberg, C. G. M., Arends, J. P., Rossen, J. W., Heeringa, P., & van Dijl, J. M. (2017). Genetic loci of Staphylococcus aureus associated with anti-neutrophil cytoplasmic autoantibody (ANCA)-associated vasculitides. Scientific Reports, 7(1), [12211]. https://doi.org/10.1038/s41598-017-12450-z
  49. Koedijk, D. G. A. M., Pastrana, F. R., Hoekstra, H., van den Berg, S., Back, J. W., Kerstholt, C., Prins, R. C., Bakker-Woudenberg, I. A. J. M., van Dijl, J. M., & Buist, G. (2017). Differential epitope recognition in the immunodominant staphylococcal antigen A of Staphylococcus aureus by mouse versus human IgG antibodies. Scientific Reports, 7, [8141]. https://doi.org/10.1038/s41598-017-08182-9
  50. Amissah, N. A., van Dam, L., Ablordey, A., Ampomah, O-W., Prah, I., Tetteh, C. S., van der Werf, T. S., Friedrich, A. W., Rossen, J. W., van Dijl, J. M., & Stienstra, Y. (2017). Epidemiology of Staphylococcus aureus in a burn unit of a tertiary care center in Ghana. PLoS ONE, 12(7), [e0181072]. https://doi.org/10.1371/journal.pone.0181072
  51. Heuker, M., Sijbesma, J. W. A., Suárez, R. A., de Jong, J. R., Boersma, H. H., Luurtsema, G., Elsinga, P. H., Glaudemans, A. W. J. M., van Dam, G. M., van Dijl, J. M., Slart, R. H. J. A., & van Oosten, M. (2017). In vitro imaging of bacteria using (18)F-fluorodeoxyglucose micro positron emission tomography. Scientific Reports, 7, [4973]. https://doi.org/10.1038/s41598-017-05403-z
  52. Bongiorni, C., Neef, J., Schmidt, B. F., van Kimmenade, A., & van Dijl, J. (2017). Enhanced protein production and methods thereof. (Patent No. WO2017112733). https://worldwide.espacenet.com/publicationDetails/originalDocument?CC=WO&NR=2017112733A1&KC=A1&FT=D&ND=3&date=20170629&DB=&locale=en_EP
  53. Amissah, N. A., Chlebowicz, M. A., Ablordey, A., Tetteh, C. S., Prah, I., van der Werf, T. S., Friedrich, A. W., van Dijl, J. M., Stienstra, Y., & Rossen, J. W. (2017). Virulence potential of Staphylococcus aureus isolates from Buruli ulcer patients. International journal of medical microbiology, 307(4-5), 223-232. https://doi.org/10.1016/j.ijmm.2017.04.002
  54. Mekonnen, S. A., Medina, L. M. P., Glasner, C., Tsompanidou, E., de Jong, A., Grasso, S., Schaffer, M., Maeder, U., Larsen, A. R., Gumpert, H., Westh, H., Voelker, U., Otto, A., Becher, D., & van Dijl, J. M. (2017). Signatures of cytoplasmic proteins in the exoproteome distinguish community-and hospital-associated methicillin-resistant Staphylococcus aureus USA300 lineages. Virulence, 8(6), 891-907. https://doi.org/10.1080/21505594.2017.1325064
  55. Neef, J., Bongiorni, C., Goosens, V. J., Schmidt, B., & van Dijl, J. M. (2017). Intramembrane protease RasP boosts protein production in Bacillus. Microbial Cell Factories, 16(57). https://doi.org/10.1186/s12934-017-0673-1
Previous 1 2 3 4 5 6 Next

ID: 68663

University of Groningen staff: edit these data

print
Follow the UGfacebook twitter linkedin rss instagram youtube