Genomics Research in Ecology & Evolution in Nature

University of Groningen > Faculty of Science and Engineering > Faculty Board FSE > FSE Research > Groningen Institute for Evolutionary Life Sciences > Genomics Research in Ecology & Evolution in Nature

  1. 2020
  2. Jimenez, D. J., Wang, Y., Chaib de Mares, M., Cortes-Tolalpa, L., Mertens, J. A., Hector, R. E., Lin, J., Johnson, J., Lipzen, A., Barry, K., Mondo, S. J., Grigoriev, I., Nichols, N. N., & van Elsas, J. D. (2020). Defining the eco-enzymological role of the fungal strain Coniochaeta sp. 2T2.1 in a tripartite lignocellulolytic microbial consortium. FEMS microbiology ecology, 96(1), [186]. https://doi.org/10.1093/femsec/fiz186
  3. Sternhagen, E. C., Black, K. L., Hartmann , E. DL., Shivega, W. G., Johnson, P. G., McGlynn, R. D., Schmaltz, L. C., Asheim Keller, R. J., Vink, S. N., & Aldrich-Wolfe, L. (2020). Contrasting patterns of functional diversity in coffee root fungal communities associated with organic and conventionally managed fields. Applied and environmental microbiology, 36(11), [e00052-20]. https://doi.org/10.1128/AEM.00052-20
  4. Dicke, M., Eilenberg, J., Salles, J. F., Jensen, A. B., Lecocq, A., Pijlman, G. P., van Loon, J. J. A., & van Oers, M. M. (2020). Edible insects unlikely to contribute to transmission of coronavirus SARS-CoV-2. Journal of Insects as Food and Feed, 6(4), 333-339. https://doi.org/10.3920/JIFF2020.0039
  5. Hendriks, K. P., Bisschop, K., Kortenbosch, H. H., Kavanagh, J. C., Larue, A. E. A., Phung, C-C., Bonte, D., Duijm, E. J., Falcão Salles, J., Pigot, A. L., Richter Mendoza, F. J., Schilthuizen, M., Anderson, M. J., Speksnijder, A. G. C. L., & Etienne, R. S. (Accepted/In press). Microbiome and environment explain the absence of correlations between consumers and their diet in Bornean microsnails. Ecology, [e03237]. https://doi.org/10.1002/ecy.3237
  6. 2019
  7. Ben Chehida, Y., Thumloup, J., Schumacher, C., Harkins, T., Aguilar, A., Borrell, A., Ferreira, M., Rojas-Bracho, L., Robertson, K. M., L. Taylor, B., A. Víkingsson, G., Sabot, F., Weyna, A., Romiguier, J., A. Morin, P., & Fontaine, M. (2019). Evolutionary history of the porpoise family (Phocoenidae) 
a perspective from mitogenomes and whole genomes. bioRxiv, 241. https://doi.org/10.1101/851469
  8. Clarkson, C. S., Miles, A., Harding, N. J., Lucas, E. R., Battey, C. J., Amaya-Romero, J. E., Cano, J., Diabaté, A., Constant, E., Nwakanma, D. C., Jawara, M., Essandoh, J., Dinis, J., Le Goff, G., Robert, V., Troco, A. D., Costantini, C., Rohatgi, K. R., Elissa, N., ... Kwiatkowski, D. P. (2019). Genome variation and population structure among 1,142 mosquitoes of the African malaria vector species Anopheles gambiaeand Anopheles coluzzii. Manuscript submitted for publication. https://doi.org/10.1101/864314
  9. Pirog, A., Ravigné, V., Fontaine, M. C., Rieux, A., Gilabert, A., Cliff, G., Clua, E., Daly, R., Heithaus, M. R., Kiszka, J. J., Matich, P., Nevill, J. E. G., Smoothey, A. F., Temple, A. J., Berggren, P., Jaquemet, S., & Magalon, H. (2019). Population structure, connectivity, and demographic history of an apex marine predator, the bull shark Carcharhinus leucas. Ecology and Evolution, 9(23), 12980-13000. https://doi.org/10.1002/ece3.5597
  10. Broker, K. C. A., Hansen, R. G., Leonard, K. E., Koski, W. R., & Heide-Jorgensen, M. P. (2019). A comparison of image and observer based aerial surveys of narwhal. Marine Mammal Science, 35(4), 1253-1279. https://doi.org/10.1111/mms.12586
  11. Raudino, H. C., Tyne, J. A., Smith, A., Ottewell, K., McArthur, S., Kopps, A. M., Chabanne, D., Harcourt, R. G., Pirotta, V., & Waples, K. (2019). Challenges of collecting blow from small cetaceans. Ecosphere, 10(10), [02901]. https://doi.org/10.1002/ecs2.2901
  12. Matthey-Doret, C., van der Kooi, C. J., Jeffries, D. L., Bast, J., Dennis, A. B., Vorburger, C., & Schwander, T. (2019). Mapping of multiple complementary sex determination loci in a parasitoid wasp. Genome Biology and Evolution, 11(10), 2954-2962. https://doi.org/10.1093/gbe/evz219
  13. Mondo, S. J., Javier Jimenez, D., Hector, R. E., Lipzen, A., Yan, M., LaButti, K., Barry, K., van Elsas, J. D., Grigoriev, I., & Nichols, N. N. (2019). Genome expansion by allopolyploidization in the fungal strain Coniochaeta 2T2.1 and its exceptional lignocellulolytic machinery. Biotechnology for Biofuels, 12(1), [229]. https://doi.org/10.1186/s13068-019-1569-6
  14. Pires, E. S., Pires Hardoim, C. C., Miranda, K. R., Secco, D. A., Lobo, L. A., de Carvalho, D. P., Han, J., Borchers, C. H., Ferreira, R. B. R., Salles, J. F., Cavalcanti Pilotto Domingues, R. M., & Martha Antunes, L. C. (2019). The gut microbiome and metabolome of two riparian communities in the Amazon. Frontiers in Microbiology, 10, [2003]. https://doi.org/10.3389/fmicb.2019.02003
  15. Jahnke, M., Gullstrom, M., Larsson, J., Asplund, M. E., Mgeleka, S., Silas, M. O., Hoamby, A., Mahafina, J., & Nordlund, L. M. (2019). Population genetic structure and connectivity of the seagrass Thalassia hemprichii in the Western Indian Ocean is influenced by predominant ocean currents. Ecology and Evolution, 9(16), 8953-8964. https://doi.org/10.1002/ece3.5420
  16. Tollis, M., Robbins, J., Webb, A. E., Kuderna, L. F. K., Caulin, A. F., Garcia, J. D., Bérubé, M., Pourmand, N., Marques-Bonet, T., O'Connell, M. J., Palsbøll, P. J., & Maley, C. C. (2019). Return to the sea, get huge, beat cancer: An analysis of cetacean genomes including an assembly for the humpback whale (Megaptera novaeangliae). Molecular Biology and Evolution, 36(8), 1746–1763. https://doi.org/10.1093/molbev/msz099
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