Yokokawa, T., Sintes, E., de Corte, D., Olbrich, K., & Herndl, G. J. (2012). Differentiating leucine incorporation of Archaea and Bacteria throughout the water column of the eastern Atlantic using metabolic inhibitors. Aquatic Microbial Ecology, 66(3), 247-256. https://doi.org/10.3354/ame01575

Yokokawa, T., De Corte, D., Sintes, E., & Herndl, G. J. (2010). Spatial patterns of bacterial abundance, activity and community composition in relation to water masses in the eastern Mediterranean Sea. Aquatic Microbial Ecology, 59(2), 185-195. https://doi.org/10.3354/ame01393

Herfort, L., Kim, J. H., Coolen, M. J. L., Abbas, B., Schouten, S., Herndl, G. J., & Sinninghe Damste, J. S. (2009). Diversity of Archaea and detection of crenarchaeotal amoA genes in the rivers Rhine and Tet. Aquatic Microbial Ecology, 55(2), 189-201. https://doi.org/10.3354/ame01294

Zhang, Y., Sintes, E., Chen, J., Zhang, I., Dai, M., Jiao, N., & Herndl, G. J. (2009). Role of mesoscale cyclonic eddies in the distribution and activity of Archaea and Bacteria in the South China Sea. Aquatic Microbial Ecology, 56, 65 - 79. https://doi.org/10.3354/ame01324

Herndl, G. J., Agogue, H., Baltar, F., Reinthaler, T., Sintes, E., & Varela, M. M. (2008). Regulation of aquatic microbial processes: the 'micobial loop of the sunlit sutface waters and the dark ocean dissected. Aquatic Microbial Ecology, 53, 59 - 68. https://doi.org/10.3354/ame01225

Gasol, J. M., Pinhassi, J., Alonso-Saez, L., Ducklow, H., Herndl, G. J., Koblizek, M., Labrenz, M., Luo, Y., Moran, X. A. G., Reinthaler, T., & Simon, M. (2008). Towards a better understanding of the microbial carbon flux in the sea. Aquatic Microbial Ecology, 53, 21 - 38. https://doi.org/10.3354/ame01230

Baltar, F., Aristegui, J., Gasol, J. M., Hernandez-Leon, S., & Herndl, G. J. (2007). Strong coast-ocean and surface-depth gradients in prokaryotic assemblage structure and activity in a coastal transition zone region. Aquatic Microbial Ecology, 50, 63 - 74. https://doi.org/10.3354/ame01156

Alderkamp, A-C., Sintes, E., & Herndl, G. J. (2006). Abundance and activity of major groups of prokaryotic plankton in the coastal North Sea during spring and summer. Aquatic Microbial Ecology, 45(3), 237-246. https://doi.org/10.3354/ame045237

Joux, F., Agogué, H., Obernosterer, I., Dupuy, C., Reinthaler, T., Herndl, G. J., & Lebaron, P. (2006). Microbial community structure in the sea surface microlayer at two contrasting coastal sites in the northwest Mediterranean Sea. Aquatic Microbial Ecology, 42, 91 - 104. https://doi.org/10.3354/ame042091

Obernosterer, G., Catala, P., Reinthaler, T., Herndl, GJ., & Lebaron, P. (2005). Enhanced heterotrophic activity in the surface microlayer of the Mediterranean Sea. Aquatic Microbial Ecology, 39(3), 293-302. https://doi.org/10.3354/ame039293

Pirker, H., Pausz, C., Stoderegger, KE., & Herndl, GJ. (2005). Simultaneous measurement of metabolic activity and membrane integrity in marine bacterioplankton determined by confocal laser-scanning microscopy. Aquatic Microbial Ecology, 39(3), 225-233. https://doi.org/10.3354/ame039225

Reinthaler, T., & Herndl, GJ. (2005). Seasonal dynamics of bacterial growth efficiencies in relation to phytoplankton in the southern North Sea. Aquatic Microbial Ecology, 39(1), 7-16. https://doi.org/10.3354/ame039007

de Boer, M. K., Tyl, M. R., Vrieling, E. G., & van Rijssel, M. (2004). Effects of salinity and nutrient conditions on growth and haemolytic activity of Fibrocapsa japonica (Raphidophyceae). Aquatic Microbial Ecology, 37(2), 171-181. https://doi.org/10.3354/ame037171

Kramer, GD., & Herndl, G. J. (2004). Photo- and bioreactivity of chromophoric dissolved organic matter produced by marine bacterioplankton. Aquatic Microbial Ecology, 36(3), 239-246. https://doi.org/10.3354/ame036239

Stoderegger, KE., & Herndl, GJ. (2004). Dynamics in bacterial cell surface properties assessed by fluorescent stains and confocal laser scanning microscopy. Aquatic Microbial Ecology, 36(1), 29-40. https://doi.org/10.3354/ame036029

Winter, C., Herndl, G. J., & Weinbauer, M. G. (2004). Diel cycles in viral infection of bacterioplankton in the North Sea. Aquatic Microbial Ecology, 35(3), 207-216. https://doi.org/10.3354/ame035207

van Rijssel, M., & Buma, A. G. J. (2002). UV radiation induced stress does not affect DMSP synthesis in the marine prymnesiophyte Emiliania huxleyi. Aquatic Microbial Ecology, 28(2), 167-174. https://doi.org/10.3354/ame028167

Reitner, B., Herzig, A., & Herndl, G. J. (2002). Photoreactivity and bacterioplankton availibility of aliphatic versus aromatic aminoacids and a protein. Aquatic Microbial Ecology, 305 - 311. https://doi.org/10.3354/ame026305

Pausz, C., & Herndl, G. J. (2002). Role of nitrogen versus phosphorus availibility on the effect of UV radiation on bacterioplankton and their recovery from previous UV stress. Aquatic Microbial Ecology, 89 - 95. https://doi.org/10.3354/ame029089

Slezak, D., Brugger, A., & Herndl, G. J. (2001). Impact of solar radiation on the biological removal of dimethylsulfoniopropionate and dimethylsulfide in marine surface waters. Aquatic Microbial Ecology, 25(1), 87-97. https://doi.org/10.3354/ame025087

Boelen, P., Veldhuis, M. J. W., & Buma, A. G. J. (2001). Accumulation and removal of UVBR-induced DNA damage in marine tropical plankton subjected to mixed and simulated non-mixed conditions. Aquatic Microbial Ecology, 24(3), 265-274. https://doi.org/10.3354/ame024265

Obernosterer, G., Sempere, R., & Herndl, G. J. (2001). Ultraviolet radiation induces reversal of the bioavailability of DOM to marine bacterioplankton. Aquatic Microbial Ecology, 24(1), 61-68. https://doi.org/10.3354/ame024061

de Bie, MJM., Speksnijder, AGCL., Kowalchuk, GA., Schuurman, T., Zwart, G., Stephen, J. R., Diekmann, O. E., & Laanbroek, HJ. (2001). Shifts in the dominant populations of ammonia-oxidizing beta-subclass Proteobacteria along the eutrophic Schelde estuary. Aquatic Microbial Ecology, 23(3), 225-236. https://doi.org/10.3354/ame023225

Heijs, S. K., Azzoni, R., Giordani, G., Jonkers, H. M., Nizzoli, D., Viaroli, P., & van Gemerden, H. (2000). Sulfide-induced release of phosphate from sediments of coastal lagoons and the possible relation to the disappearance of Ruppia sp. Aquatic Microbial Ecology, 23(1), 85-95. https://doi.org/10.3354/ame023085

Archer, SD., Verity, PG., & Stefels, J. (2000). Impact of microzooplankton on the progression and fate of the spring bloom in fjords of northern Norway. Aquatic Microbial Ecology, 22(1), 27-41. https://doi.org/10.3354/ame022027

Panzenbock, M., Mobes-Hansen, B., Albert, R., & Herndl, G. J. (2000). Dynamics of phyto- and bacterioplankton in a high Arctic lake on Franz Joseph Land archipelago. Aquatic Microbial Ecology, 21(3), 265-273. https://doi.org/10.3354/ame021265

Janse, I., Zwart, G., Maarel, M. J. E. C. V. D., & Gottschal, J. C. (2000). Composition of the bacterial community degrading Phaeocystis mucopolysaccharides in enrichment cultures. Aquatic Microbial Ecology, 22(3), 119-133. https://doi.org/10.3354/ame022119

Visser, P. M., Snelder, E., Kop, A. J., Boelen, P., Buma, A. G. J., & van Duyl, F. C. (1999). Effects of UV radiation on DNA photodamage and production in bacterioplankton in the coastal Caribbean Sea. Aquatic Microbial Ecology, 20(1), 49 - 58. https://doi.org/10.3354/ame020049

Noordkamp, D. J. B., Schotten, M., Gieskes, W. W. C., Forney, L. J., Gottschal, J. C., & van Rijssel, M. (1998). High acrylate concentrations in the mucus of Phaeocystis globosa colonies. Aquatic Microbial Ecology, 16(1), 45-52. https://doi.org/10.3354/ame016045

Schut, F., Prins, R. A., & Gottschal, J. C. (1997). Oligotrophy and pelagic marine bacteria: Facts and fiction. Aquatic Microbial Ecology, 12(2), 177-202. https://doi.org/10.3354/ame012177

Osinga, R., deVries, KA., Lewis, WE., vanRaaphorst, W., Dijkhuizen, L., & vanDuyl, FC. (1997). Aerobic degradation of phytoplankton debris dominated by Phaeocystis sp in different physiological stages of growth. Aquatic Microbial Ecology, 12(1), 11-19. https://doi.org/10.3354/ame012011

Janse, I., van Rijssel, M., Gottschal, J. C., Lancelot, C., & Gieskes, W. W. C. (1996). Carbohydrates in the North Sea during spring blooms of Phaeocystis: A specific fingerprint. Aquatic Microbial Ecology, 10(1), 97-103. https://doi.org/10.3354/ame010097