Data from: Postglacial climate changes and rise of three ecotypes of harbor porpoises, Phocoena phocoena, in western Palearctic waters

Fontaine, M. (Creator), Roland, K. (Creator), Calves, I. (Creator), Austerlitz, F. (Creator), Palstra, F. P. (Creator), Tolley, K. A. (Creator), Ryan, S. (Creator), Ferreira, M. (Creator), Jauniaux, T. (Creator), Llavona, A. (Creator), Öztürk, B. (Creator), Öztürk, A. A. (Creator), Ridoux, V. (Creator), Rogan, E. (Creator), Sequeira, M. (Creator), Siebert, U. (Creator), Vikingsson, G. A. (Creator), Borrell, A. (Creator), Michaux, J. R. (Creator) & Aguilar, A. (Creator), University of Groningen, 3-Jun-2014


  • Michael Fontaine (Creator)
  • Kathleen Roland (Creator)
  • Isabelle Calves (Creator)
  • Frederic Austerlitz (Creator)
  • Friso P Palstra (Creator)
  • Krystal A Tolley (Creator)
  • Sean Ryan (Creator)
  • Marisa Ferreira (Creator)
  • Thierry Jauniaux (Creator)
  • Angela Llavona (Creator)
  • Bayram Öztürk (Creator)
  • Ayaka A Öztürk (Creator)
  • Vincent Ridoux (Creator)
  • Emer Rogan (Creator)
  • Marina Sequeira (Creator)
  • Ursula Siebert (Creator)
  • Gísli A Vikingsson (Creator)
  • Asunción Borrell (Creator)
  • Johan R Michaux (Creator)
  • Alex Aguilar (Creator)
  • University of Namur
  • UMR 1152, Université Paris Diderot, Paris, France.
  • Stellenbosch University
  • University of Notre Dame
  • Univ Minho, Universidade do Minho, CEB Ctr Biol Engn
  • University of Liege
  • Istanbul Univ, Istanbul University
  • Institut du Littoral et de l'Environnement (ILE), Université de La Rochelle, La Rochelle
  • University College Cork
  • Department of Physiology, University of Veterinary Medicine Hannover, Hannover, Germany.
  • Marine & Freshwater Research Institute, Reykjavik
  • Dept. of Animal Biology, Faculty of Biology, University of Barcelona


Despite no obvious barriers to gene flow in the marine realm, environmental variation and ecological specializations can lead to genetic differentiation in highly mobile predators. Here, we investigated the genetic structure of the harbor porpoise over the entire species distribution range in western Palearctic waters. Combined analyses of ten microsatellite loci and a 5,085 bases-pairs portion of the mitochondrial genome revealed the existence of three ecotypes, equally divergent at the mitochondrial genome, distributed in the Black Sea, the European continental shelf waters, and a previously overlooked ecotype in the upwelling zones of Iberia and Mauritania. Historical demographic inferences using Approximate Bayesian Computation (ABC) suggest that these ecotypes diverged during the Last Glacial Maximum (~23–19 kilo-years ago, kyrBP). ABC supports the hypothesis that the Black Sea and upwelling ecotypes share a more recent common ancestor (~14 kyrBP) than either does with the European continental shelf ecotype (~28 kyrBP), suggesting they likely descended from the extinct populations that once inhabited the Mediterranean during the glacial and post-glacial period. We showed that the two Atlantic ecotypes established a narrow admixture zone in the Bay of Biscay during the last millennium, with highly asymmetric gene flow. This study highlights the impacts that climate change may have on the distribution and speciation process in pelagic predators and shows that allopatric divergence can occur in these highly mobile species and be a source of genetic diversity.

The data package contains two datasets.
Date made available3-Jun-2014
PublisherUniversity of Groningen
Geographical coverageWestern Palearctic waters, NE Atlantic, Iberia, Mauritania, Black Sea
Access to the dataset Open

    Keywords on Datasets

  • allopatric divergence, speciation, upwelling, climate changes, Phocoena phocoena, Cetacea
Related Publications
  1. Postglacial climate changes and rise of three ecotypes of harbour porpoises, Phocoena phocoena, in western Palearctic waters

    Fontaine, M. C., Roland, K., Calves, I., Austerlitz, F., Palstra, F. P., Tolley, K. A., Ryan, S., Ferreira, M., Jauniaux, T., Llavona, A., Öztürk, B., Öztürk, A. A., Ridoux, V., Rogan, E., Sequeira, M., Siebert, U., Vikingsson, G. A., Borrell, A., Michaux, J. R. & Aguilar, A., Jul-2014, In : Molecular Ecology. 23, 13, p. 3306-3321 16 p., doi: 10.1111/mec.12817.

    Research output: Contribution to journalArticleAcademicpeer-review

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ID: 71297052