Evolutionary and Ecological Genomics

Faculteit Science and Engineering
Jaar 2019/20
Vakcode WBLS19037
Vaknaam Evolutionary and Ecological Genomics
Niveau(s) bachelor
Voertaal Engels
Periode semester II b
ECTS 5
Rooster rooster.rug.nl

Uitgebreide vaknaam Evolutionary and Ecological Genomics
Leerdoelen At the end of the course, the student is able to:
1. Describe the forces that drive the evolution of prokaryotic and eukaryotic organisms.
2. State the nature and dynamics of genetic variation within prokaryotic and eukaryotic populations and species in relation to their environment
3. Describe how the complexity of the genome can accommodate (promote and constrain) the adaptation of different organisms (prokaryotes and eukaryotes)
4. Define evolutionary processes, such as selection at different organizational levels, genetic drift, and horizontal gene transfer
5. Assess how evolutionary processes affect genomic changes and can they be recognized at the genomic level
6. Asses how to use metagenomics to analyze complex prokaryotic communities
Omschrijving The aim of the course is to present how the complexity of the genome of prokaryotes and eukaryotes, in relation to the complexity of the ecosystem, affects ecological and evolutionary processes at different levels. A central theme is how variation at the level of genotypes leads to variation in phenotypes, in interaction with environmental settings. Students will be familiar with population genetic processes such as mutation, genetic drift, horizontal gene transfer, migration and selection. They will learn how these processes become evident at the genetic level and can lead to evolutionary changes and constraints. They will be instructed to evaluate how selection can act at different organizational levels, such as genic and individual selection.
They will acquire knowledge about metagenomics and genomic techniques and how these can be used to address ecological and evolutionary questions on prokaryotes and eukaryotes.
Uren per week
Onderwijsvorm Hoorcollege (LC), Opdracht (ASM), Practisch werk (PRC)
(Traditional lecture 24 hrs, Presentation 54 hrs, Computer work 12 hrs and Self study 50 hrs)
Toetsvorm Mondeling tentamen (OR), Presentatie (P), Schriftelijk tentamen (WE)
(There is a written (open book) exam on the theory part (50% of grade, minimum grade 5.5) at the end of the second week. The other 40% of the grade will be based on the group presentations, given at the end of the course (minimum grade 5.5). The final 10% of the grade refers to the participation during lectures, practical work and presentation. Presentation needs to be performed before the grade can be given.)
Vaksoort bachelor
Coördinator prof. dr. J. Falcao Salles
Docent(en) prof. dr. L.W. Beukeboom ,dr. ir. M.G.J. de Vos ,prof. dr. J. Falcao Salles ,dr. L.P.W.G.M. Jacobus Mgn Van De Zande ,prof. dr. B. Wertheim
Verplichte literatuur
Titel Auteur ISBN Prijs
No required book.
Literature (overview
articles, as well as
research articles) will be
provided during the
course. For the
presentation additional literature search needs to
be performed.
Entreevoorwaarden
Opmerkingen During the presentations the presence is mandatory.
During the lectures and practical work the presence is not mandatory, however the grade depends for 10% on student participation during the lectures.
The open book written exam is mandatory and a minimal grade should be 5.5. the possibility to resit exam will be planned in the schedule

The course units assumes prior knowlegde and skills, acquired from the following other course units: Genetics, Ecology and Evolution, Microbiology, Evolutionary Ecology, Research Skills in Ecology and Evolution, Research Skills in Life Sciences

Capacity max: 60 students

The course unit if (often) followed by students from the course unit(s) and degree programme(s): Biology and Life Science & Technology (Ecology & Evolution, Behaviour and Neurosciences, Biomedical Sciences, Molecular Life Sciences).
Opgenomen in
Opleiding Jaar Periode Type
BSc Biology: major Behaviour and Neurosciences 2 semester II b keuzegroep
BSc Biology: major Ecology and Evolution 2 semester II b keuzegroep
BSc LS&T: major Behaviour and Neurosciences (cohort 2018 and 2019) 2 semester II b keuzegroep